Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0878 ATGGATGTCATGCCTGGAGGGGTCTACTTTGAAAGGATTGTTTTTGAGCTATTTTATGACATTGCACCCTTCACTGCAGAAAATTTTTATGCTCTGTGTACAGGAAAAATGGGAATCAGTCCCAGAACTAAAAAGCCTATGCACTACGGGAATAGTTTCTTTCATGGGGTTAATGAAGGTAGATCCTATGTGAAGGGAGGTGCCTTGTGCTTAAAAACTGGAAAATCTGGAGAAAGCATATATGGTCCACATTTCCCAGTTGATCCAAAAGTCTTGAAGCATGACAGAGAAGGGCTATTGTCGATGTCCATAAGAGATCAGAAAGCTTCTCGTTCTGGTTTTTTGATCACATTGAAAGCTGATCAAAGCCTTGACAGCCACCATGTGGTCTTTGGGAAGGTTGTGTGTGGGATAGATACATTACGGGCTATTGGAGAACATTGTTACAAGAGTGCAACTAAAGTTTGGTGTTGTGGTGTATGGTATAATGTGGGACGTGTTCCTCCTGGTGTGTTTGTGAGGCCTCCGTGGAAGCCCACCAAGTGGGACCTACCTCCAAGAGAATTGGAGGAGGAGAACATGGAAAAGAGGGAGAAGATTAGGAGAACTGATTGA 615 0.4341 MDVMPGGVYFERIVFELFYDIAPFTAENFYALCTGKMGISPRTKKPMHYGNSFFHGVNEGRSYVKGGALCLKTGKSGESIYGPHFPVDPKVLKHDREGLLSMSIRDQKASRSGFLITLKADQSLDSHHVVFGKVVCGIDTLRAIGEHCYKSATKVWCCGVWYNVGRVPPGVFVRPPWKPTKWDLPPRELEEENMEKREKIRRTD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0878 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Alju03g0878 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Alju03g0878 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Alju03g0878 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 IPR002130 GO:0000413|GO:0003755
Alju03g0878 204 SUPERFAMILY Cyclophilin-like 2 151 IPR029000 -
Alju03g0878 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 147 - -
Alju03g0878 204 Gene3D - 1 160 IPR029000 -
Alju03g0878 204 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 144 IPR002130 GO:0000413|GO:0003755
Alju03g0878 204 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 146 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0878 Alju-ChrAlju03 35294996 35297729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0878 15 144 U-box Gene Family AT5G67530 33.588 2.58e-11 60.1