Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0874 ATGGATCAGCTAGTTCCCAGCTCTCTCCACTGTCTCATACCTTCGGTCTCTCTTCTTTCTCCGTCGCTCTTTGGTTCGCGTCTCTATCGCCAGCCGCCAGGTTTTCGTCGCCATAAAGTTGCAACCGGCGAGAAAAAACCCAGCGACAAAAGAAAGACCATGGCCGAGAAGAAGAATCCCATGGTTTTTATGGATGTCTCGATTTGTATGGTGCCTGTTGGAAGGATGGTTTTTGAGCTCTTTAGAGATGACGCACCTGCAATGGTAGAAAATTTCCGTGCACTATGTACGGGTGAAAAAGGAATTGGGAAGATAACAAAGTCCCGCCTACACTACAAGGGTTCTTATTTCTATGACATTTGGCAAAAGTACACTTGGGTGAAGGGTGGGGCTTTTGGCAGCCCAGTGGGTTGTTGGGGAGAAAGCATTTATGGGAAATATTTCCCAGATGAGTGGCCCGAACGTAAATGTAATGAAAGAGGACTTCTTTGCATGTATATTGGTGATCGATATACACTCGGGTCGCATTTTGTGATCACTTTGGAGCCTGATCAGAGTCTCGACAGGTGCCATATCGTTTTTGGAAGACTTTCACGAGGATTTGAAACATTGGATCGGATTTCAAATGTGGTTGTGGGGCAACAGGCTCAAGTTTCAAATTGTGGAGAATTTAATCTCCATGAGAGCAGAGAAGGAAGAAAAAGAGAAAAAGGAGAACGAGAAGAGAGAATCAGAAGAAAGAGAAGAGAACGAGAAGAAGAGAGAATCAGAATAGAGAGAAGAGAAGAGAGAATCAGAGGAGAAAGAAAAAGAGAACGAGAAGAGAGAATCAGAAGAGAGAGAAGAGAACAAGAAGAGAGAATCAGAGGAGAAAGAAAAAGAGAACGACGAGGAGAAAGAATCAGACGAGGAGGAAAAGGAGAAAAGGAGAAAAGAGAGAAGAGAGAATGA 951 0.4395 MDQLVPSSLHCLIPSVSLLSPSLFGSRLYRQPPGFRRHKVATGEKKPSDKRKTMAEKKNPMVFMDVSICMVPVGRMVFELFRDDAPAMVENFRALCTGEKGIGKITKSRLHYKGSYFYDIWQKYTWVKGGAFGSPVGCWGESIYGKYFPDEWPERKCNERGLLCMYIGDRYTLGSHFVITLEPDQSLDRCHIVFGRLSRGFETLDRISNVVVGQQAQVSNCGEFNLHESREGRKREKGEREERIRRKRREREEERIRIERREERIRGERKREREERIRRERREQEERIRGERKRERRGERIRRGGKGEKEKREKRE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0874 316 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 62 223 - -
Alju03g0874 316 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 73 214 IPR002130 GO:0000413|GO:0003755
Alju03g0874 316 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 176 IPR002130 GO:0000413|GO:0003755
Alju03g0874 316 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 176 188 IPR002130 GO:0000413|GO:0003755
Alju03g0874 316 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 80 95 IPR002130 GO:0000413|GO:0003755
Alju03g0874 316 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 189 204 IPR002130 GO:0000413|GO:0003755
Alju03g0874 316 MobiDBLite consensus disorder prediction 267 316 - -
Alju03g0874 316 Coils Coil 267 294 - -
Alju03g0874 316 Coils Coil 244 264 - -
Alju03g0874 316 Gene3D - 46 225 IPR029000 -
Alju03g0874 316 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 63 210 IPR002130 GO:0000413|GO:0003755
Alju03g0874 316 SUPERFAMILY Cyclophilin-like 56 219 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0874 Alju-ChrAlju03 34829767 34836382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0874 74 215 U-box Gene Family AT5G67530 33.333 1.18e-09 57.4