Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0856 ATGTCGGAAGTGGATGAGTACCGTTGCTTTATTGGTGGCCTTGCATGGTCAACATCTGATAGAAAGCTGAGGGATGCATTTGAGAAGTTTGGCAAACTCATTGAGGCAAAGGTGGTGGTTGACAAATTCTCTGGGCGCTCTCGTGGTTTTGGATTTGTTACATTTGATGAAAAGAAAGCAATGGAAGAGGCTATTGAGGCTATGAATGGGATGGATTTAGATGGTCGAACTATCACTGTTGATAAAGCTCAGCCTCAACAAGGATCTACTAGAGATGATGGTGATCGTTACCGTGATAGGGGGAATGCCCTAGTGAAGGAGCAGGTGGGGGAAAGTACAGTGGCAGGGAAAGTAGATATGGTGGCAAGAGTGGTGGTGGTGGTGGTCACTATGGTCCTGATAGGAATGCAGATCGCTATTCTGGTGGGCGTAACAGGGACTCAGTGCATAATCTTCATTGAGCTGCAAAATTGGATGTGCTGCTTTTGCTGCCTCAACTTCCTTTATAATGGCCATGTTCTGGGATTCTCGTTTGGGGATCAATGA 546 0.4615 MSEVDEYRCFIGGLAWSTSDRKLRDAFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEAMNGMDLDGRTITVDKAQPQQGSTRDDGDRYRDRGNALVKEQVGESTVAGKVDMVARVVVVVVTMVLIGMQIAILVGVTGTQCIIFIELQNWMCCFCCLNFLYNGHVLGFSFGDQ 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0856 181 CDD RRM2_NsCP33_like 8 83 - -
Alju03g0856 181 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Alju03g0856 181 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 1 103 - -
Alju03g0856 181 SMART rrm1_1 8 81 IPR000504 GO:0003723
Alju03g0856 181 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 79 IPR000504 GO:0003723
Alju03g0856 181 Gene3D - 2 111 IPR012677 -
Alju03g0856 181 SUPERFAMILY RNA-binding domain, RBD 4 100 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0856 Alju-ChrAlju03 34023363 34024461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0856 10 87 Eukaryotic Initiation Factors Gene Family AT1G22760 29.487 1.51e-06 45.8