Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0814 ATGGCCGTACATTCAAAGCTCAGGCTTATTTGTTACTCACAAGATCTTGTGGATGGGCAGCCGATTTTTGTTTCTTCAAATTGTACTCCTGTCAAGGCTTTGAAATTTGAACCTGCGGGTCATGCCTTCCATTCTGCTGCACTTAAACTACTTGGTGTTGAGGAAGAAAATTCAGACGCTGATGATAAAAAGGTGGTTGATGATAATGAACAGAATTATTTTCCATCTGACTCTTATAGCAGCAAGAGTAAAAAGAAATCTGGTTCTGGAGACAAGCAACAAGATCACTATGCATTGTTGGGTTTGGCCCATCTAAGATACCTTGCCACAGAGGATCAAATACGTAAAAGCTATCGTGAAACTGCTTTGAGGTATCATCCTGACAAACAGGCAGCTCAACTTCTTGCTGAGGAGACTGAAGCTGCAAAGCAGACAAAGAAGGATGAGATAGAAAGTCATTTTAAGGAAATACAGGAAGCATATGAAGTTTTGATTGATCCTGTGAAGAGAAGAATCTATGATTCCACAGATGAGTTTGATGATGAGATCCCTACTGACTGTGCCCCACAGGACTTCTTCAAAGTGTTTGGTCCTGCATTTATGAGGAATGGGAGGTGGTCAGTTAACCAACCTGTTCCATCTTTAGGTGACAACAACACTCCATTAAAAGAGGTGGATAATTTCTACAATTTCTGGTACACCTTTAAAAGCTGGAGGGAGTTTCCTCATACTGATGAATTTGATCTTGAGCAAGCTGAATCTCGGGACCACAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCAAGGAAGGAAGAATCTGCACGAATACGTACTCTCGTTGATAATGCTTATAAGAGAGACCCTAGAATACTGAAGAGGAAGGAAGAGGAAAAAGCTGAGAAGCAAAAAAAAAAGGAGGCTAAGTTTCTTGCAAAGAGGTTGCAGGAAGAAGAAGCTGCCAGGATTGCGGAAGAGGAGAAGCAGCGAAAGGAGGAGGAAGAGAAACGAGCCGCAGAAGCTTCTGTACAACAGAAGAAGTTGAAGGAGAAAGAGAAAAAGCTGTTGCGAAAAGAGCGTGCTCGTCTTCGAACACTTTCAGGACCTATTGTGTCACAAAATTTAATTGGTATATCTGAGGATGATGTAGAAAGTCTATGCATGTCACTTGATACTGAGCAACTGAGGTGTTTGTGTGAGAAAATGGATGGCCTACAGATTTCAGAACAAGCAAAAGTTCTCAGAGATGCACGTGATTGCAAACATGATGGAGAAAATAAGAAAGAAGAAACAGCTAATCAACAAAATGGTTCAGTTAAGGCTAATGGCAGTGCCTCTGCCTCACAAGGAAAGTTGGAGAAGAAGGAAAAACCTTGGAGTAAAGAAGAGATTGATCTATTGAGAAAGGGAATGGTAAAATATCCCAAAGGAACTTCACGAAGGTGGGAGGTTATTTCAGAGTACCTAGGTACCGGACGGTCGGTGGAAGAAATTATGAGGGCAACTAAAACTGTACTCCTCCAGAAGCCTGATTCTTCCAAATCCTTTGACGCATTTCTTGAGAAAAGGAAACCTGCACAATCAATTACATCTCCACTGACAAGTAGAGCAGAATTAGAAGGGGAATCAACTCCAGCGATCTCCCAAAGTAATACTCCCTCGACAACAAATAACAACTCCGAAGACTCTAGCAGCAAAGTCGCTGACAACCAAGTCTCTCCTGGTTCTTCTGTTACTGCAAATGGAGTACCCTCTAGTTCAGACCAAGATGTCTGGTCAGCTGTACAGGAGAGAGCATTGGTTCAGGCTTTGAAAGCCTTCCCAAAGGAAACTCCCCAGAGATGGGAAAGGGTTGCAGCAGCTGTCCCAGGAAAGACTATGAACCAGTGCAAGAAAAAGTTTGCAATGATGAAGGAGAGCTTCAGAAGCAAGAAAAATGCAGTTTGA 1956 0.4238 MAVHSKLRLICYSQDLVDGQPIFVSSNCTPVKALKFEPAGHAFHSAALKLLGVEEENSDADDKKVVDDNEQNYFPSDSYSSKSKKKSGSGDKQQDHYALLGLAHLRYLATEDQIRKSYRETALRYHPDKQAAQLLAEETEAAKQTKKDEIESHFKEIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPVPSLGDNNTPLKEVDNFYNFWYTFKSWREFPHTDEFDLEQAESRDHRRWMERQNAKLSEKARKEESARIRTLVDNAYKRDPRILKRKEEEKAEKQKKKEAKFLAKRLQEEEAARIAEEEKQRKEEEEKRAAEASVQQKKLKEKEKKLLRKERARLRTLSGPIVSQNLIGISEDDVESLCMSLDTEQLRCLCEKMDGLQISEQAKVLRDARDCKHDGENKKEETANQQNGSVKANGSASASQGKLEKKEKPWSKEEIDLLRKGMVKYPKGTSRRWEVISEYLGTGRSVEEIMRATKTVLLQKPDSSKSFDAFLEKRKPAQSITSPLTSRAELEGESTPAISQSNTPSTTNNNSEDSSSKVADNQVSPGSSVTANGVPSSSDQDVWSAVQERALVQALKAFPKETPQRWERVAAAVPGKTMNQCKKKFAMMKESFRSKKNAV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0814 651 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 9 650 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Alju03g0814 651 Gene3D DnaJ domain 78 187 IPR036869 -
Alju03g0814 651 Pfam DnaJ domain 95 174 IPR001623 -
Alju03g0814 651 Gene3D - 586 651 - -
Alju03g0814 651 CDD SANT 595 641 IPR001005 -
Alju03g0814 651 ProSiteProfiles Myb-like domain profile. 595 641 IPR001005 -
Alju03g0814 651 SUPERFAMILY Homeodomain-like 460 503 IPR009057 -
Alju03g0814 651 CDD DnaJ 95 166 IPR001623 -
Alju03g0814 651 CDD SANT 461 503 IPR001005 -
Alju03g0814 651 SUPERFAMILY Chaperone J-domain 93 201 IPR036869 -
Alju03g0814 651 MobiDBLite consensus disorder prediction 329 352 - -
Alju03g0814 651 Coils Coil 297 369 - -
Alju03g0814 651 MobiDBLite consensus disorder prediction 426 462 - -
Alju03g0814 651 Coils Coil 129 156 - -
Alju03g0814 651 MobiDBLite consensus disorder prediction 58 92 - -
Alju03g0814 651 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Alju03g0814 651 FunFam Myb family transcription factor 589 649 - -
Alju03g0814 651 MobiDBLite consensus disorder prediction 434 452 - -
Alju03g0814 651 PRINTS DnaJ domain signature 149 169 IPR001623 -
Alju03g0814 651 PRINTS DnaJ domain signature 48 66 IPR001623 -
Alju03g0814 651 PRINTS DnaJ domain signature 118 133 IPR001623 -
Alju03g0814 651 SMART dnaj_3 94 169 IPR001623 -
Alju03g0814 651 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Alju03g0814 651 Pfam Myb-like DNA-binding domain 594 639 IPR001005 -
Alju03g0814 651 ProSiteProfiles SANT domain profile. 590 645 IPR017884 -
Alju03g0814 651 MobiDBLite consensus disorder prediction 530 593 - -
Alju03g0814 651 ProSiteProfiles Myb-like domain profile. 454 509 IPR001005 -
Alju03g0814 651 SMART sant 591 643 IPR001005 -
Alju03g0814 651 SMART sant 458 511 IPR001005 -
Alju03g0814 651 Gene3D - 455 512 - -
Alju03g0814 651 SUPERFAMILY Homeodomain-like 593 648 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0814 Alju-ChrAlju03 33285946 33287901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0814 96 295 C2H2 Transcription Factor Family AT1G74250 29.707 4.52e-20 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju03g0814 DnaJ 3.6e-18 CL0392