Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0802 ATGGATAAGTACGAGCTAGTGAAGGACATAGGATCTGGGAATTTCGGGGTGGCCAAGCTGATGCGAAATAAAGAAACCAAGGAGCTTGTTGCCATGAAATACATTGAACGAGGTCACAGGATCGATGCCAATGTAGCCAGGGAAATCATAAACCATAGATCTCTTTGCCACCCGAACATAATTCGGTTCAAGGAGGTGTTTTTGACTCCAACACATCTTGTAATAGTCATGGAGTATGCAGCTGGTGGAGAGCTTTTTGATCGCATTTGCACTGCTGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGCCATACTTTGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTATTGGATGGCAGCCCCGCTCCACGTCTGAAAATTTGTGATTTTGGCTATTCTAAGTCATCTCTACTTCATTCTAGGCCAAAATCAACAGTCGGAACTCCAGCCTATATTGCACCAGAGGTTCTTTTACGTAGAGAATATGATGGAAAGTTGGCTGATGTATGGTCTTGTGGAGTAACTCTTTATGTGATGCTGGTGGGAGCATACCCATTTGAGGACCCAGAAGATCCTAAGAACTTCAGAAAAACCATAAATCGGATTATGTCCGTTCAATACAAGTTCCCAGATTACGTACACATATCTCAAGACTGTAAACATCTGCTTTCGCGCATTTTTGTCGAAAATCCAGCAAAGAGAATAAGCATGAAAGAAATCAAGTCCCACCCATGGTTTCTAAAGAACCTGCCAAGGGAATTGACAGAAACAGCCCAAGCTGTCTACTACAAGAAAGAAAACCCAACATTTTCACTTCAGAGTGCAGAAGACATAATGAAAATTGTTGAAGAGGCCAAAACTCCACCCTCAGATTCTAAGTCAGCCGGAGAGTTTGGTTGGGGAGAGGAAGGAGGAGAAGAGGAAGAAGGCATAACAAATGATGAGGCAAATGGTGAGGAGGAAGAGGAAGAGTGCGAAAAGAGAGTCGAGGAGGCACAGGCCAGCCGTGATGTTAATAAGGTTGTGAGTTGTAACTTCAAGTTAAGAACCAGACAAACCGATCTGGAAGGAGAGCTAGCGGAGAATAACTTAGTCGATGTGGAAAAGGAAGAAAAGCTAGTGGAGGATAGTTGCCATTGCTACTGGTGGAGAATCGTCGCCGCTGTCGCTGTCGCTGTTGCCATCATCTGTGAAGAAAATGGGGGATGA 1251 0.4428 MDKYELVKDIGSGNFGVAKLMRNKETKELVAMKYIERGHRIDANVAREIINHRSLCHPNIIRFKEVFLTPTHLVIVMEYAAGGELFDRICTAGRFSEDEARYFFQQLISGVSYCHTLQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLLRREYDGKLADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTINRIMSVQYKFPDYVHISQDCKHLLSRIFVENPAKRISMKEIKSHPWFLKNLPRELTETAQAVYYKKENPTFSLQSAEDIMKIVEEAKTPPSDSKSAGEFGWGEEGGEEEEGITNDEANGEEEEEECEKRVEEAQASRDVNKVVSCNFKLRTRQTDLEGELAENNLVDVEKEEKLVEDSCHCYWWRIVAAVAVAVAIICEENGG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0802 416 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Alju03g0802 416 Coils Coil 327 349 - -
Alju03g0802 416 SUPERFAMILY Protein kinase-like (PK-like) 2 289 IPR011009 -
Alju03g0802 416 MobiDBLite consensus disorder prediction 315 339 - -
Alju03g0802 416 MobiDBLite consensus disorder prediction 300 339 - -
Alju03g0802 416 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0802 416 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0802 416 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Alju03g0802 416 PANTHER SERINE/THREONINE KINASE 3 329 - -
Alju03g0802 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Alju03g0802 416 CDD STKc_SnRK2 3 259 - -
Alju03g0802 416 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Alju03g0802 416 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Alju03g0802 416 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Alju03g0802 416 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0802 Alju-ChrAlju03 33041289 33047096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0802 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 42.647 7.50e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Alju03g0802 Pkinase 1.1e-70 CL0016