Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0793 ATGGATTTTCAAAAGATGAAGCAATTAGTTGAAGATGGATCATCATCATCTATCAAGAAGGTGGTGGATGGTACTTTGAAAGGTCCAAACAAGCCGTTATTTGATTTGAATTTGTTGCCAGAAGATTCAGAAGAAGGTGATGGTCATGAGTTTCACATTGAAATATTTGGAAGTGCTGAAACCCCTCAAATTGATCTGAATCTCACTGATAATGAAGTGGTGGATGCAAATTTAAATTCAAATGGATTGGTTCTTCCTTATCAAATTCCTACTTATGGTGGAGACAACAATGGTGCTTCCATCTTCAACAACACCACAACTTCATCAGCAACAAATATGGTGACATCCTCCTATCATCCTTTTGTCTATAAAAGGAAAGTTTGCCACCATGATGGCACTTCGGCCAGTACCGGCACCGCGAGGAGCTTACGCCCTCGCCAGCCGTCATCACCAAACTGTGACCGACGAATCTGCACAAATTACAAATGCAGAACAAGGAACACTCCCATGTGGCGTAGGGGACCTCTAGGTCCAAAGACTCTCTGCAATGCGTGTGGAATTCAGTATAAGAAGCGAGTGTCAAGCAGAGGAAGCGACCTGGTGTGA 606 0.4307 MDFQKMKQLVEDGSSSSIKKVVDGTLKGPNKPLFDLNLLPEDSEEGDGHEFHIEIFGSAETPQIDLNLTDNEVVDANLNSNGLVLPYQIPTYGGDNNGASIFNNTTTSSATNMVTSSYHPFVYKRKVCHHDGTSASTGTARSLRPRQPSSPNCDRRICTNYKCRTRNTPMWRRGPLGPKTLCNACGIQYKKRVSSRGSDLV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0793 201 Pfam GATA zinc finger 162 192 IPR000679 GO:0006355|GO:0043565
Alju03g0793 201 SMART GATA_3 152 200 IPR000679 GO:0006355|GO:0043565
Alju03g0793 201 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 156 197 - -
Alju03g0793 201 ProSiteProfiles GATA-type zinc finger domain profile. 163 196 IPR000679 GO:0006355|GO:0043565
Alju03g0793 201 MobiDBLite consensus disorder prediction 133 152 - -
Alju03g0793 201 CDD ZnF_GATA 157 200 IPR000679 GO:0006355|GO:0043565
Alju03g0793 201 PANTHER GATA TRANSCRIPTION FACTOR 116 191 - -
Alju03g0793 201 Gene3D - 154 200 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0793 Alju-ChrAlju03 32810596 32815586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0793 158 191 C2C2-Gata Transcription Factor Family AT3G20750 73.529 6.60e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju03g0793 GATA 1.5e-14 CL0167