Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0784 ATGAGACATATGGACGGAATGATTTCGTCTTTCATGGGTGCTTTACTTCTTTGCGCAATCTTAGTGTTTAATTTGATGCTGAATGTTTATGGTAATGCCGAAGGTGATGCCCTGAATGCATTTAGGACCAGGGTAGCTGATCCAAACAACCTTCTTCAAAGCTGGGATGCTACCCATGCCAATCCTTGCGAATGGTTTCATGTTACATGCGATAGTGAAAATAGCGTGACCCGTGTTGATCTTGGAAATGCCAACCTTTCGGGTCAACTAGTTGTACAGCTTGGTCTACTCCCAAGTTTGCAGTACTTGGAGCTTTATAGCAATAATATAACTGGAAAAATCCCAGATGAATTTGGAAATTTGACAAATTTGGAGAGCTTGGATCTGTACGCCAATAATATATTTGGTCGCATACCTGAAACATTGGGCAGGCTTCAAAAACTACGTTTTCTACGACGGTTTGGCTTGTGGCGTCTCAACAATAACTCCTTGAATGGAGCCATTCCCATGACCTTGACTACTGTCTATTCACTAAAAGTCCTTGATCTTTCAACAAACAAGCTACAAGGAGACATCCCAACCAGTGGTTCATTTCAATCATTTACTGAACTCAGTTTTGAAAAAAAATCCTGGTTTGAAACCACTAAACATTACACCTCGACCAATTTCACCAACGCCGCCACCATCTCGTTCAGTGTGCAAGGCAAGAGAGCTACTGGAGCTAGTGCTGCAGGAATTGGTGCTGCTGCTCTATTGTTTACAGTCTCTGCACTTGCACCTGCACTTGCACTTGCTTGTTATTACCGCAAAAGGATTCCAATTGCTTGCTGCTGGAAAAGGAGACCGTCAGCTAAGGAGGACCTTGAAGCTCACTTTTGCCAGCTAAAAAAGTTCCCCCTGCATGAACTTCAAGTTGCAACAGACAACTTTAGTAACAAAAACTTTCTGGGTAGTGGTGGGTTTGGTAAGGTTTACAAAGGACGGTTCCCTGATGGGTCTTTAGTTGCAGTGAAAAGACTTAAAGAGGAATGCGCTCAGGGTGGAGAGCTACAATTTCAAACGGAAATAAGATTGATCAGCATGGCTGTCCATCGTAATTTGCTTCGGCTGCGTGGTTTTTGCATGACACCTACTGAACGGTTGCTTGTGTATCCTTTCATGGCTAACGGTAGTGTGGAATCATGTTTACAAGACCGCCCTAAATCCAAACCACCGCTTGAATGGCCTGTACGGAAGCGAATTGCATTGGGAACTGCCAAGGGGCTTGCTTATTTACATGATGATTGCAGTCCACAGATCATTCACCGTGCTGTTAAAGCCGCAAATATATTGTTAGATGGAGAGTGTGAAGCAGTTGTTGGGGACTTTGGCTTGGCAAAACTTATGGATTACGAAGATACTCATGTTACCACTGCTGTGCGTGGTACAATTGGATACATTGCACCAGAATACCTCTCATCTGGAAAGTCTTCGGAGAAGACTGATGTTTTTGGTTATGGTGTGATGCTTCTTCAACTAATAACTGGACAGAAGGCTTTTGATCTTGCACGACGTGCTGTTGACGATAATGTCATGTTACTTGATTGGGTGAAAGAGCTTTGGAAAGACAAGAGATTGGAAAGAATAGTGGATGCTGATCTGGGGGCTGAATATAATGAAGGGGAGGTAGAGAAACTAATCCAATTGGCCATGCTATGCACACAAAGCTCTGCTATAGAAAGACCAAAGATGTCTGAGGTGGTGAGGATGCTTGAAGGTGATGGTTTAGCTGAAAAATGGGATCAATGGCAGAAAGATGAGATTTATAGGCCAAATAATCTGACCCTTCTCCCTAATGCCAATTGGGCGATTGTAGACTCAGTTTCACATATGCCTCCTGATGAACTGTCAGGTCCCAGCATAGGTGTTTCTTCTAAGGCTCAAACTTGA 1929 0.4339 MRHMDGMISSFMGALLLCAILVFNLMLNVYGNAEGDALNAFRTRVADPNNLLQSWDATHANPCEWFHVTCDSENSVTRVDLGNANLSGQLVVQLGLLPSLQYLELYSNNITGKIPDEFGNLTNLESLDLYANNIFGRIPETLGRLQKLRFLRRFGLWRLNNNSLNGAIPMTLTTVYSLKVLDLSTNKLQGDIPTSGSFQSFTELSFEKKSWFETTKHYTSTNFTNAATISFSVQGKRATGASAAGIGAAALLFTVSALAPALALACYYRKRIPIACCWKRRPSAKEDLEAHFCQLKKFPLHELQVATDNFSNKNFLGSGGFGKVYKGRFPDGSLVAVKRLKEECAQGGELQFQTEIRLISMAVHRNLLRLRGFCMTPTERLLVYPFMANGSVESCLQDRPKSKPPLEWPVRKRIALGTAKGLAYLHDDCSPQIIHRAVKAANILLDGECEAVVGDFGLAKLMDYEDTHVTTAVRGTIGYIAPEYLSSGKSSEKTDVFGYGVMLLQLITGQKAFDLARRAVDDNVMLLDWVKELWKDKRLERIVDADLGAEYNEGEVEKLIQLAMLCTQSSAIERPKMSEVVRMLEGDGLAEKWDQWQKDEIYRPNNLTLLPNANWAIVDSVSHMPPDELSGPSIGVSSKAQT 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0784 642 Pfam Leucine Rich repeats (2 copies) 98 138 IPR025875 -
Alju03g0784 642 FunFam Somatic embryogenesis receptor kinase 1 30 222 - -
Alju03g0784 642 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 594 - -
Alju03g0784 642 SUPERFAMILY Protein kinase-like (PK-like) 290 585 IPR011009 -
Alju03g0784 642 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Alju03g0784 642 SMART LRR_typ_2 97 120 IPR003591 -
Alju03g0784 642 SMART LRR_typ_2 175 200 IPR003591 -
Alju03g0784 642 SMART LRR_typ_2 121 145 IPR003591 -
Alju03g0784 642 ProSiteProfiles Protein kinase domain profile. 310 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0784 642 FunFam Somatic embryogenesis receptor-like kinase 1 387 604 - -
Alju03g0784 642 Pfam Protein kinase domain 311 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0784 642 Gene3D Phosphorylase Kinase; domain 1 281 386 - -
Alju03g0784 642 Gene3D Ribonuclease Inhibitor 31 220 IPR032675 -
Alju03g0784 642 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Alju03g0784 642 FunFam Somatic embryogenesis receptor kinase 1 280 386 - -
Alju03g0784 642 Gene3D Transferase(Phosphotransferase) domain 1 387 604 - -
Alju03g0784 642 SUPERFAMILY L domain-like 34 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0784 Alju-ChrAlju03 32602041 32611712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0784 20 632 Receptor kinase-like Gene Family AT4G33430 62.405 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju03g0784 Pkinase 8.8e-42 CL0016