Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0673 ATGGCCAGAGTTTCTACATCTGTATCTCCGAAACGTGGGGAATGGGTGAAGGGAACGTTGGTTGGATCTGGATCTTTTGGTACTGTTCATTTAGCCATGAGCAAATCCACAGGAAGACTCTTTGTTGTTAAATCAACACACACAAGGGCTGAATTTGCAGCTTTAGAGAATGAGGTTGAGATTCTCAAGAATCTAGAACCATCTCCTTATATAGTCCAATACTTAGGGTCAGAAAGAGATGGAGATGATCTCAAAGTTCTAATGGAGTACATGGCTGGGGGTAGTTTGGCTGATATTACAGAGAAATTTGGTGGATCATTACCGGAAGATGTGGTTCGTTTGTACACAAAAGAAATTCTTAAAGGCCTCAATTTTCTTCATGGTAATGGGATAGTGCACTGTGACCTTAAGTGCAAAAATGTGCTTCTGGGGTCTTGTGGGGACATCAAATTGGCAGATTTTGGATGTGCAAGGAAGGTGAAGGACTTGAAAAATGAAGTTTTGATGAAGATCAAGAAGAATAACAAGTCTTTGGAATGTGTTAGTGGGACCCCTCTATGGATGGCTCCTGAAGTTTTGAGGAATGAGAAGCTTGATTTTGCTGCAGATATATGGTCTTTGGGATGTACTGTTATTGAAATGGCTACTGGTAGGCCTCCTTGGGGTGCTTCTAAGTATGATTCAAACCCAATGGCTCTTCTTTTGAAGATTTCTTTTGGTGATGAGATACCTAAACTACCAACCCATTTTTCAAAGGAGGGTTTGGATTTTTTGAGGATGTGTTTTGAGAGAGACTCAAGAAAAAGGTGGACATGTGAGGAATTACTTAGGCACCCATTTGTGTCAAGGGATTATTCATCTGTTGTAACAACACCACCACTACTATCTTCACCCGAAGAAGAAACTGCTTCCTCACCAGTCAGTGTGTTGGGGATTACAAGTTTTGAGGATGCTTATGATGAAATAATGGATGAACCAGAAAGTCCAGTGGGAAATGATTTCTCAGTCATGAAGCCGTTCACATGTTGCAAAGATGGAAGAAAAGGAGAAAGTGTAATTCCATGGCATGGAGATGATTGTGCATTATGTTCATCTCAGAATTGGATTAATGTCAGATCATAG 1122 0.4064 MARVSTSVSPKRGEWVKGTLVGSGSFGTVHLAMSKSTGRLFVVKSTHTRAEFAALENEVEILKNLEPSPYIVQYLGSERDGDDLKVLMEYMAGGSLADITEKFGGSLPEDVVRLYTKEILKGLNFLHGNGIVHCDLKCKNVLLGSCGDIKLADFGCARKVKDLKNEVLMKIKKNNKSLECVSGTPLWMAPEVLRNEKLDFAADIWSLGCTVIEMATGRPPWGASKYDSNPMALLLKISFGDEIPKLPTHFSKEGLDFLRMCFERDSRKRWTCEELLRHPFVSRDYSSVVTTPPLLSSPEEETASSPVSVLGITSFEDAYDEIMDEPESPVGNDFSVMKPFTCCKDGRKGESVIPWHGDDCALCSSQNWINVRS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0673 373 Gene3D Transferase(Phosphotransferase) domain 1 11 323 - -
Alju03g0673 373 SUPERFAMILY Protein kinase-like (PK-like) 13 311 IPR011009 -
Alju03g0673 373 ProSiteProfiles Protein kinase domain profile. 15 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0673 373 SMART serkin_6 15 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0673 373 CDD STKc_MAPKKK 14 281 - -
Alju03g0673 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Alju03g0673 373 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Alju03g0673 373 Pfam Protein kinase domain 17 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0673 373 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 13 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0673 Alju-ChrAlju03 29020880 29022001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0673 5 310 MAP Kinase Kinase Kinase AT5G55090 45.223 1.27e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju03g0673 Pkinase 2.4e-62 CL0016