Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0642 ATGGAACAATCAGAACACAGAACCAGTGATCCCAGCCACAACTACCAACAACGTCGTCAGCTTCTGCATCATTATCAAAATCAGTTACAGTTAGCATCGTCGCAGGCTGTGGTCCCTTTCAATGGAGGAGGAGGTCCCTCATGTTTCATCAATGTGGGCCCCACTTCCATCCAAGCTGGCCTCTCTGGTGGTGGGGTTGTAACTACAACTCCTTCCTTGTCACCATCATCATCTTCGTGGGCTCCAGTTCCTCTCGTAGCGCCGCTTACCATCGTCGTTCCTAGATCTGATCAGCCACACTCATCTGCACGATCGGGCGGAAATGTGGTCCATCCGATCAGGACACAACAACAAGGTCATCAGCAGCAACAATTGTCGATTTCTGCAGCAACGGCGGCGAGGGATGTTGTGGCTGCGTCGACGAACCCGCCACTGCCGAGAACCAGGGACAGACACATCAAGGTGGATGGTCGTGGCCGGAGAATCCGAATACCAGCAGCTTGTGCGGCTAGGGTTTTTCAATTAACCAGAGAGCTGGGCCATAGGTCAGACGGAGAGACCATCGAGTGGCTTCTGCGACAGGCGGAGCCGTCAATCATCATCGCCACCGGCACCGGCGTGAGGCCCTCAAACTTCTCAACAACACTCAACCTGTCGTCGCAATGGAACTGTGGTTCTTCCACCGTCTTGGCTCCGCCGTCGATGTCCGTTCCTCATACATTCCATGGAGTTCTACCTCTCTCTGCTCATCAGCATCATCAACCTTACGAAGATTCATTTCTGCATTCCACCTTGTTAGGGTTGCAGCAGCCTCAGCCTCATCAGCAACAAGAGTATCAACAGCTTCATTTATTGACTTCCGGTCAAATTTCAGAAGCGCTTCCCAATGCCGCCGGTGGAGAAGAAGACAGCGGAGAACCGACTGAGAATTATATGAAAAAACGTTACCGAGAAGATTTATTCAAAGAAGACGCTAACCAACAAGAACAAAGCCAATGTGTAGGTAATGATGATCAGGATTCTTCCATAACTTCCTTACCTGACTTACAATTGCAGAAAGCTGGATCTTCGAGTTCGAACGTCCTTCGTCCGGCTACCAATTTTCTCCCCACCACCCCTATGTGGGTGGTGCCCAGCGGCAGTGGTGGCGGCGGCGGAGCTGTGAGTAGCGCATTTTGGATGCTGACCTCCGGGAGTGGAGGTGCAGGTGTGGCCGCCGCAGCAGAAAGTGGCGGTTCTGTGTTATTTCCGACCACGCAAACCGGTGGCGGTGGTGGAAGCATGAATCATCACTTTCAAGCAGGCTCGCTGCAATTCATGCCGAGTTCGAATTTGGGCCATGGAAGTGTGGAATTTCATGGTCTGCAACTGGCACCAACGACGTCGTTCTTGGTGCCTAATCATCATCAGATGTTGGATGATCAGTCCAACACGGCGGCTACTGCATTGAATGCGTTCCATGGTGGTGTTGAAGATGTGAATCCAGAGGATGACTTTCATCAACATGAAGCTGGTGATAATGGAGAAGAAAGTGGTTACAGTTCTGAATGA 1551 0.5145 MEQSEHRTSDPSHNYQQRRQLLHHYQNQLQLASSQAVVPFNGGGGPSCFINVGPTSIQAGLSGGGVVTTTPSLSPSSSSWAPVPLVAPLTIVVPRSDQPHSSARSGGNVVHPIRTQQQGHQQQQLSISAATAARDVVAASTNPPLPRTRDRHIKVDGRGRRIRIPAACAARVFQLTRELGHRSDGETIEWLLRQAEPSIIIATGTGVRPSNFSTTLNLSSQWNCGSSTVLAPPSMSVPHTFHGVLPLSAHQHHQPYEDSFLHSTLLGLQQPQPHQQQEYQQLHLLTSGQISEALPNAAGGEEDSGEPTENYMKKRYREDLFKEDANQQEQSQCVGNDDQDSSITSLPDLQLQKAGSSSSNVLRPATNFLPTTPMWVVPSGSGGGGGAVSSAFWMLTSGSGGAGVAAAAESGGSVLFPTTQTGGGGGSMNHHFQAGSLQFMPSSNLGHGSVEFHGLQLAPTTSFLVPNHHQMLDDQSNTAATALNAFHGGVEDVNPEDDFHQHEAGDNGEESGYSSE 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0642 516 MobiDBLite consensus disorder prediction 489 516 - -
Alju03g0642 516 MobiDBLite consensus disorder prediction 325 344 - -
Alju03g0642 516 MobiDBLite consensus disorder prediction 326 344 - -
Alju03g0642 516 MobiDBLite consensus disorder prediction 491 509 - -
Alju03g0642 516 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 98 474 IPR005333 GO:0003700
Alju03g0642 516 ProSiteProfiles TCP domain profile. 148 202 IPR017887 -
Alju03g0642 516 Pfam TCP family transcription factor 148 318 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0642 Alju-ChrAlju03 28200130 28201680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0642 148 401 TCP Transcription Factor Family AT1G35560 42.248 1.52e-35 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju03g0642 TCP 1.7e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g0642 03 28200130 28201680 Alju03g0642 03 28200130 28201680 ECH