Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0631 ATGCCTCTCTCCATCAACATTGGCTTTGGCTACTCCATTGCCATCGCCCTCGCTTTTTTGGTTCTTGCCTCAACGCTCATTCTCTCTTTCTACCTCTGTTGCCGCAAGCGTAACCGAAACCCCAGTTCGGATTCGTACCCGAATCCGAATCCGAATATGAATCCATCTGGGTCGAATGTGGGATCCGAGGGTATAGTGCTGCCTAGGGTAATTTTTGTGGCGGAGGAGGAGGAGGAGGAGGATAATGAGAGCGCCGTCGTGGGGCTTGACGACAACGTTATAAACTCGTACCCGAGGTTTCAGTACAGTAGGGGAGCTATGGGTGTCGGAAGCAGTACCATGTGTTCGATCTGTTTGTGTGAGTATAGAGATTCGGAGATGCTGAGGATGATGCCGGAGTGTCGCCATTATTTCCACCTCTTGTGCCTTGACTCTTGGCTTAAGCTTAATGGGTCTTGTCCTGTTTGCCGGAACTCGCCGCTCATGACGCCGATTTCTACGCCTCTGCAAGAAGTTGTGCCGCTCTCTCAGTTCCCGGCCGATCGGCGGCGACGGAGATCCAGAGTTGTTCATATCTTTGGTCAGCAAATTTCTTTTCAAATAAACGATTTTACTCCTCCATATCTCTCCATGATTAGCTTTCCAGTTCTTGCCTCAATTTCAGTTCTTATGCTCTGGCTCTATGAACATCTTTACCTTGAGCTGCAAATTCCAGCACTAAATATCCTCAGTTCAGAAGATATAGGAATGCCAAAACTGAATGGTACTTATAAATTAGCAGTATGGAGGAGGGCTTACTGGACAATCTTTATATTGGGTTCTCTTGCCCTTCTCTCTGTTGCTACCTTGTCTAAATTTTCTATCTCTAAATCGTTGCTTGAGACTGGATCTCTATGCAACCATTTGAATCCTGAGGAGACAACAAAAGATATTCGAAACAACGTGATTGTAACGGTGCAAGATGTAACTCACAGAATTCAACAAGAATTGCAGAGCTTGAGAGATTCAGAGTCAGATACAGCTTCTGTGGAGGAAATGAGTGCCTTTCTTGCTGATATTTTAGGGCTCTTGGAATCCATGGAGGCATCTCTTTCAGATGATGAAGGGATTGATCAGCAGCATAAAATTGGCCCCACAACTTCTCATAATCCACTTTTGGAAGCAAAGAAACGGTCTGATGAGCCGGCTAATTACTTCTTCCGGGAGGAGATTCGCAAGTACGTGAAGATCAAGCCTAACAGGTTGAGGAAACAGAATTTCATGGGGGCTAATGGAACCTTTACTAGTATTGGCCATGCTTGCTTCGCCATGAAGGAAGAGCTCGAGGAATACATGGATTACGACATTGGTGAAATGTGCAATGATGACTGGAAACTGGCTCAGAAGCTCATGGTTCATGGCTGTGATCCTCTCCCAAGGAGAAGATGCCTAGTGAGGGCGCCCCGACTGTACATGCAGCCGTTTCCGATCAATGAGTCCCTCTGGAAGCTCCCAGACGACAGAAATGTCCGCTGGAGTCAATACCGGTGCAAGAACTTCAATTGCCTTGCCGGGAACACGGCTCCCAAGGGATTCTTCAAGTGCTCAGATTGCTTCAACCTCACTCATCATGAAATGCCCAGATGGGTAAAATTGGATCCCAATTCTAAAATCCAAACTTCTGATTTCCTCATATCTGATGTGCTTCAAATCAAGCCTGGAGAGATCAGAATAGGATTGGACTTCAGTGTAGGAACTGGTACTTTTGCTGCTAGGATGAGAGAACACAATGTGACTATAGTTTCTGCAACTATCAACCTAGGAGCACCCTTCAATGAAATGATAGCTCTAAGAGGACTTGTTCCTCTATACTTAACCATAAATCAACGGCTCCCATTCTTCGATAACACCCTCGATTTGATCCACACGACGAGGTTTCTTGACGGGTGGATCGACTTTGTGCTGCTGGATTTCGTGTTGTATGATTGGGATAGGGTTTTGAGGCCGGGTGGGTTGTTGTGGATTGATAGCTTCTTCTGTTTGAAGGAGGATTTGGATGATTACTTGGAGGCTTTCAAGATGCTGAGGTACAAGAAACGTAAGTGGGTGGTTGTTCCAAAGATTGATAGAAGTGATCAAGAAGTGTTCTTTTCTGCTGTCTTAGAGAAGCCTCCTAGACCATTCTGA 2166 0.458 MPLSINIGFGYSIAIALAFLVLASTLILSFYLCCRKRNRNPSSDSYPNPNPNMNPSGSNVGSEGIVLPRVIFVAEEEEEEDNESAVVGLDDNVINSYPRFQYSRGAMGVGSSTMCSICLCEYRDSEMLRMMPECRHYFHLLCLDSWLKLNGSCPVCRNSPLMTPISTPLQEVVPLSQFPADRRRRRSRVVHIFGQQISFQINDFTPPYLSMISFPVLASISVLMLWLYEHLYLELQIPALNILSSEDIGMPKLNGTYKLAVWRRAYWTIFILGSLALLSVATLSKFSISKSLLETGSLCNHLNPEETTKDIRNNVIVTVQDVTHRIQQELQSLRDSESDTASVEEMSAFLADILGLLESMEASLSDDEGIDQQHKIGPTTSHNPLLEAKKRSDEPANYFFREEIRKYVKIKPNRLRKQNFMGANGTFTSIGHACFAMKEELEEYMDYDIGEMCNDDWKLAQKLMVHGCDPLPRRRCLVRAPRLYMQPFPINESLWKLPDDRNVRWSQYRCKNFNCLAGNTAPKGFFKCSDCFNLTHHEMPRWVKLDPNSKIQTSDFLISDVLQIKPGEIRIGLDFSVGTGTFAARMREHNVTIVSATINLGAPFNEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFVLYDWDRVLRPGGLLWIDSFFCLKEDLDDYLEAFKMLRYKKRKWVVVPKIDRSDQEVFFSAVLEKPPRPF 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0631 721 SUPERFAMILY RING/U-box 114 161 - -
Alju03g0631 721 Gene3D Vaccinia Virus protein VP39 548 701 IPR029063 -
Alju03g0631 721 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 553 687 IPR029063 -
Alju03g0631 721 SMART ring_2 115 156 IPR001841 -
Alju03g0631 721 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 274 720 - -
Alju03g0631 721 MobiDBLite consensus disorder prediction 41 61 - -
Alju03g0631 721 CDD RING-H2_EL5-like 115 157 - -
Alju03g0631 721 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Alju03g0631 721 Pfam Ring finger domain 114 157 IPR001841 -
Alju03g0631 721 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 563 672 IPR004159 GO:0008168
Alju03g0631 721 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 161 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0631 Alju-ChrAlju03 27261383 27265140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0631 88 183 C3H Transcription Factor Family AT2G35910 53.125 2.71e-29 114