Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0621 ATGGCAATTGTAGCAACCTCATCCTCATCTCCCACCATGAGCCTCAGCCACGATGACACCACCACAACCGCCGCCACCAATGGCTGCAGCACCCTCAACAGCCCTGATGAAGACGACAACGACCAGCACGACATGGTCATGCCCGGCTTCCGCTTCCACCCAACCGAAGAAGAACTGATCGACTTCTACCTCCGCCGGAAAGTCGAAGGCAAGCGTTTCAATGTCGAGCTCATCACCTTCCTCGATCTCTATCGCTACGACCCATGGGAACTTCCTGCTATGGCGGCCATCGGAGAGAAGGAGTGGTACTTCTACGTTCCAAGAGATAGGAAGTACCGGAACGGTGATCGGCCGAACAGAGTGACGACGTCGGGGTATTGGAAGGCAACCGGAGCTGATAGAATGATTCGAGCTGTGGAGAGTTCAAGGTCAATTGGGTTGAAGAAAACCCTAGTTTTCTATTCAGGCAAAGCTCCAAAAGGGATTAGAACCAGTTGGATTATGAATGAGTATCGCTTGCCTCACCATGAAACCCAACGCTTCCAAAAGGCAGAGATATCTCTTTGCAGAGTGTACAAGAGACCTGGTGTAGAAGACCATCCCTCTCTTCCTCGCAATCTCCCAACAAGACTGTCTTCTTCATCAAGACCATCTTCTTCTTCAGACAAGCATCATTATACTAAGAACAACATCAACCTTGTTCCAGACATGTTTCATCATCATCAAAACATGGGATTTCTCGAACAACCTCATCATCATCATCATCAAGATCAGCAAATAACCAACGAAACCGATCAGGGAAGCAGTAGCAGTACAGCTGCAACTACAACTACCACCACCACTAACAACAACAACAATAATAATTCAATATTAATGATGGATGATATGAATAGGCTAGTGACTTATAATAATACTAATAACCAACAATATTTACAATACTATAACACTGGTATTATTAACCCTCCTCCTCCTCCTGGAAATCATCATCTTCCTCCTCATCAACTTCAACATCAGCATCATCATCATCTTCAGTTCTCTAATCTGTTATTGCAGCAGCAGCAGCCACAAGTTCATCAACAACCAACGGTGGCTCTGAATAGTTCGCTTCCTATTACCTCTTTCTCTGACAGATTGTGGGAGTGGAATCCATTAATCCCTGAAGCTACCAACCGAGAGTTCAGCAACATGTCCTTTAAGTAA 1200 0.4558 MAIVATSSSSPTMSLSHDDTTTTAATNGCSTLNSPDEDDNDQHDMVMPGFRFHPTEEELIDFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAVESSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETQRFQKAEISLCRVYKRPGVEDHPSLPRNLPTRLSSSSRPSSSSDKHHYTKNNINLVPDMFHHHQNMGFLEQPHHHHHQDQQITNETDQGSSSSTAATTTTTTTNNNNNNNSILMMDDMNRLVTYNNTNNQQYLQYYNTGIINPPPPPGNHHLPPHQLQHQHHHHLQFSNLLLQQQQPQVHQQPTVALNSSLPITSFSDRLWEWNPLIPEATNREFSNMSFK 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0621 399 MobiDBLite consensus disorder prediction 1 42 - -
Alju03g0621 399 MobiDBLite consensus disorder prediction 249 289 - -
Alju03g0621 399 MobiDBLite consensus disorder prediction 206 227 - -
Alju03g0621 399 FunFam NAC domain-containing protein 35 55 197 - -
Alju03g0621 399 MobiDBLite consensus disorder prediction 261 289 - -
Alju03g0621 399 SUPERFAMILY NAC domain 46 194 IPR036093 GO:0003677|GO:0006355
Alju03g0621 399 Gene3D NAC domain 55 197 IPR036093 GO:0003677|GO:0006355
Alju03g0621 399 MobiDBLite consensus disorder prediction 197 227 - -
Alju03g0621 399 ProSiteProfiles NAC domain profile. 46 194 IPR003441 GO:0003677|GO:0006355
Alju03g0621 399 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 44 284 - -
Alju03g0621 399 Pfam No apical meristem (NAM) protein 48 173 IPR003441 GO:0003677|GO:0006355
Alju03g0621 399 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0621 Alju-ChrAlju03 26965357 26968870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0621 45 210 NAC Transcription Factor Family AT2G02450 92.771 1.54e-114 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g0621 NAM 7.7e-35 No_clan