Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0616 ATGCATCCCCTAAGCGAAGCTGAGATAGATTCGTCAAAAGAAATTGAGATGGGACAAAGAATTGGGACTCGACTCTTTGTGAGCAGATTATCATTCTTCACAACAGCTAGCCACCTCAGAAATCTTTTTTCTCCGTTTGGAAAAATTACAGAAGCTTGTCTAGTGAAGGACCCAAAAACTCAAAGGCCTAAGGGATTTGGGTTTGTCTCCTATGAGTCAGAAATTGAAGCAGAGAGGGCTATGAATGCCATGAATGCCAGGGATGGCCCAGCTGCGCCAAGGAAAAGAATAGAAGAAGCATCTGACTTCTTCATGCATGCTCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCCCAAATCACCATTCAATCCCAAATACCTCTTCTCCGCCTTCGGCGCTGCACCTCCTGGACGGACGCAACGAAGATCATCAGCATCCTTCCTACCATAA 477 0.4696 MHPLSEAEIDSSKEIEMGQRIGTRLFVSRLSFFTTASHLRNLFSPFGKITEACLVKDPKTQRPKGFGFVSYESEIEAERAMNAMNARDGPAAPRKRIEEASDFFMHAPLGSGGYSSVGRAPLLQLGPKSPFNPKYLFSAFGAAPPGRTQRRSSASFLP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0616 158 CDD RRM_SF 25 85 - -
Alju03g0616 158 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 23 102 IPR000504 GO:0003723
Alju03g0616 158 SUPERFAMILY RNA-binding domain, RBD 22 86 IPR035979 GO:0003676
Alju03g0616 158 SMART rrm1_1 24 100 IPR000504 GO:0003723
Alju03g0616 158 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 24 86 - -
Alju03g0616 158 Gene3D - 5 101 IPR012677 -
Alju03g0616 158 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 25 87 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0616 Alju-ChrAlju03 26865797 26871993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0616 23 85 Eukaryotic Initiation Factors Gene Family AT4G34110 41.270 8.34e-10 54.7