Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0612 ATGGAAGGCTTATCGCAATCAGTACCTCGAACAGTGGAGGAGGTTTTTAGCGACTTCAAGGGCAGAAGAGCTGGAATGATTAAGGCCCTCACTACGGATGTTGAAAAGTTCTACCAGCAGTGCGACCCTGAGAAGGAGAACTTGTGTCTATATGGATTTCCCAATGAAACATGGCAAGTGAATTTGCCTGTTGAGGAAGTGCCTCCTGAACTTCCTGAGCCAGCTCTAGGTATAAATTTTGCTAGGGATGGGATGCAAGAAAAGGACTGGTTATCACTTGTTGCAGTTCACAGTGACGCATGGCTGCTTGCTGTTGCTTTCTATTTCGGTGCTCGATTTGGCTTTGGTAAGAATGAGAGGAAAAGGCTTTTTCAAATGATAAATGATCTCCCAACCATATTTGAAGTTGTGACAGGAAGTGCCAAGCAATCAAAGGATCAATCAGCTGCTCATACCAATGGTAACAAAGGCAAATCAAGTGGGAAGTCCCGCCAATCTGAGTCACAGGCCAGGGGAGTGAAGATGTCACCACCACCCAAAGAAGAGGATGAGAGTGGAGAAGAAGATGAAGACGATGAACAAGGTGCTACATGCGGGGCGTGTGGTGATAACTATGCCAATGATGAATTCTGGATCTGTTGTGACGTGTGTGAGAGATGGTTCCATGGCAAATGTGTCAAAATTACTCCTGCTAAGGCTGAACACATTAAGCAATACAAGTGCCCAAGCTGCAGCAACAAAAGGGCTAGAGTCTAG 756 0.4577 MEGLSQSVPRTVEEVFSDFKGRRAGMIKALTTDVEKFYQQCDPEKENLCLYGFPNETWQVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGSAKQSKDQSAAHTNGNKGKSSGKSRQSESQARGVKMSPPPKEEDESGEEDEDDEQGATCGACGDNYANDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0612 251 ProSitePatterns Zinc finger PHD-type signature. 198 244 IPR019786 -
Alju03g0612 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 250 IPR013083 -
Alju03g0612 251 SMART PHD_3 197 245 IPR001965 -
Alju03g0612 251 ProSiteProfiles Zinc finger PHD-type profile. 195 247 IPR019787 -
Alju03g0612 251 CDD PHD_AL_plant 198 247 IPR044104 -
Alju03g0612 251 FunFam PHD finger alfin-like protein 190 246 - -
Alju03g0612 251 MobiDBLite consensus disorder prediction 144 172 - -
Alju03g0612 251 SUPERFAMILY FYVE/PHD zinc finger 187 248 IPR011011 -
Alju03g0612 251 MobiDBLite consensus disorder prediction 144 194 - -
Alju03g0612 251 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Alju03g0612 251 PANTHER CPG BINDING PROTEIN 9 250 IPR045104 GO:0006355|GO:0042393
Alju03g0612 251 Pfam PHD-finger 198 247 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0612 Alju-ChrAlju03 26827093 26831383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0612 1 248 Alfin-like Transcription Factor Family AT1G14510 81.452 2.31e-135 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Alju03g0612 Alfin 9.7e-70 No_clan