Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0605 ATGTCAGAAATGCGGGTTTCTGATCTCCACTTGAAGAAGGAGCTCACTCAAATTCGCAAAGCTGCTCGTGTATTGAGGGATCCTGGTACTACTTCTTCGTGGAAGTCGCCACTTAGTTCGTCGAGATCTGTAGCGGCTGCTTCCGCATGGAAGAACAATGGCAACTCTCAACTTCATTCTCAGTTGTCCCTTCCGAGTGGGAGCAACAATGGGAAGGACAAGATGGTGTTCTTGTACAATTGGAAGAATTACAAATCATCGAGTGAGAAACACAATGGCGATGATAAAGACGAAGAAGAAGAGGAGTATGATGAAGATGGTGGTGGAAATGATGGATCTTCGTCTCTTCTGGGGAGTTTCGAGGATAGCCTCAGTGATGCTCGCAATGGTTGCGATTCCAAGAGCGATACTTGCTTAGGTGTTGGTGGGAGTGGGATTCGTTCTTCCATTTTCAGGTGCAAAGATGCAAATCCTGTTGCGTTAGGCACGCCATCGACCAGAAGATCACTGGAGATTAAGAAAAAGAGTAAGAAAAGCAAAAATGCCCATTTGGATATTCTAAGAAAATATCAGCAAAGAGAAACCAATCTTGGGAAAGCTTTAGTGAATCCCAAGCATCATATTCATCGGTCAATAGCTTATAGCCGGGAGGACTCGGTTGGGCAGTCTGATGATACTGAAGATTGCTGCAATTCTGAAGATTTAACACGAAACTCAGGACCATCTCCTTTGCTTTTGAAGCTCAAGCATAAGAATTGGTCTCGCCCTAACTCTAACTTGTTGAAAAGTAATAGAAAAGAGGATTCTTCCTATAGCACTCCTGCAATGTCTACCAGTTCTTATAATAGGTATGGTCAACACAATCCTAGTACCGTTGGATCCTGGGATGGCACGACAACCTCGGTAAATGATGCTGATGATGAAGTAGATGATCTTTTGGATTTGCCTGGTCGCCAAGGATGTGGGATACCTTGCTATTGGTCAAAGAAGACTCCAAAACATCGAGGGATGTGTAGGAGTTGTTATTCACCTTCACTTTCAGACACTCTAAGGAGGAAAGGAAGTAGCATGCTTTGTGGAAGTCAAACTATCTATCCTAGACACCGGAGATCCTTGTCAAGCTCTCACAAGCGGAGAATTTCTTCAAGGAGTGCTCAAGGTGTTCTACCATTGCTCACTAACAGTGATGATGTTAGAGGGTCATCTCCAGGAACTGGCATGAGTGATGATGAGCTTTCTACAAACTATGGGGAGCTTGATCTTGAGGGCATAAGCAGGTTGGATGGAAGAAGGTGGTCCTCAAGTTGTCGGAGTCAAGAAGGATGGGAGATTGTAGCTTTCAATGGAGAAGGGGATGATGAAGGCACTTCAGAAAATAGTAGGAGTTTCAGTCAAAAGTATAAGCCTATGTTCTTTAGTGAATTGATTGGGCAGAATATTGTGGTCCAATCACTTATAAACGCTGTTTCAAGAGGTCGAATTGCTCCTGTTTATCTTTTCCAAGGTCCACGTGGGACTGGTAAAACATCGGTGGCTAGGATTTTCGCTGGTGCATTGAATTGTATAACTCCTGATGAAACTAAACCTTGTGGTTACTGCAGGGAATGTGCAAATTTCATTTCTGGTAAGAGCAGGGACCTTTTGGAAGTTGATGGAACCAATAAAAAAGGGATTGATAGAGTTAGACATCTATTGAAAAGATTATCAGTTAGGTCTTCTTCAGCCTCCTCACGATACATGGTCTTTGTTATTGATGAGTGTCATTTGTTACCCTCTAAGACATGGTTGGCATTTCTTAAATCTCTGGAAGATCTACCTCAGCGAGTGGTGTTTATATTTATAACAACAGATCTTGACAATGTGCCCCGAACAATACAATCTAGATGCCAAAAGTACCTTTTTAACAAAATTAAAGATGCAGATATAGTAGCACGGCTAAGGAAAATATCTGCTGAGGAGAAACTGGATGTTGAAACAGATGCACTGGATCTTATTGCTATCAATGCAGATGGCTCACTTCGGGATGCAGAAACTATGTTAGAACAGCTGAGTTTGCTGGGAAAAAGAATCACTACTAGTCTTGTCAACGAACTTATGGGGATTGTTTCAGATGAAAAATTACTGGAACTTTTGGAGTTAGCAATGTCATCAGACACTGCAGAAACAGTGAAAAGGGCCAGAGAATTGATGGACTGTGGAGTTGATCCAATTGTTTTGATGTCCCAACTGGCAAGCCTCATTATGGACATCATTGCCGGATCATATACTGTTATAGATGACAAACCTGGTGATTCATTTTTTGGCGGACGAAGTTTGAATGAATCGGAGTTGGAGAGATTAAAGCATGCTTTGAAGCTTCTCTCAGAGGCTGAGAAACAATTAAGGACTTCTAGTGAACGCTCGACATGGTTCACAGCTACTCTGTTACAACTCGGTTTGATGCCTTCAGATCTTACTCAGACCACCACCAGCAGGAGGCAGAGCAGCAAGACTACTGATGATGATCCATCAAGTGCTTCAAGAGAAGTAACTGCTCACAAGCACAAGTCAGATGCTCAGTGTATGCCTCAGAAATCTACATCACCTGCATCTCTGCAGAAAGCTGTGAATAGAAACCCCAGCCACCAAAGGGAGTTATCATCAAAGTTTGATGGTTTCAGCTTGAATTCGAAGCCGTTAAATAGTCCAGTCATAGATGATGATGCTGCACCTGTTTCATTTGATGATCGTACAGCCAGTAATGTTACATTTAGATGCATAGATTCAGGAAAGTTATGTGATATCTGGGCACATTGTATTGGAAGGTGTCACTCAAAGACATTGAAGCTGCTGCTACATAATCATGGAAAACTTGTATCCATATGTGAAGTTGAAGGTCTGCTGGTTGCATATGTTGCATTTGGAGATGCTGATATTAAACTTAGGGCTGAAAGGTTTTTGAGCAGCATAACAAACTCCATGGAAATGGTTTTGAGACGAAATGTAGAGGTCAGAATAATCCACTTGCTTGATGGTGAAGATGAAGATCAGATCAATCTATCAGGCCCAAAACAGCCAAAATCAATAATAGCAAATGAGAAGGAACATAGACAAGGTCATACAAGAGGAAGAGACACTTTCTCAGATTTTCCTCCTTTGCTGGATGGAAACTTGCAATCTACCAATGATTCGTCAGATTTACTGGTTGATGGAAATGGTGTAAGAGAGAGATCAGATATTCCAATGCAAAGGATTGAATCCATTATTCGTGAGCAGAGGCTGGAAACTGCTTGGTTACAGGCTGTAGGAAAAGGCTCCCCAGGATCTTTAAGTCGCTTAAGACCTGAAAAGAATCAGGTCTTACCTCAGGAAGGTATCTACTGTAAAGACCCTACAGAGTCCATGGACTCGATGAGGTTCTCCTCTCAGCATAGGGAAGATGACATCAATCATGAAGTCAAAGTTTTGAAAGCTAAAAATGAGAGGGTCCTACAGAAGGATCATATTGGAATTGGAAGAAGGGCTGACTGTTACTCCATGTCTCCTAGTTTATTGCATGATGGCAGTTTAGCAGGAACTTCCATCAAAGAGAGTCTGGGATATGAATCAGGAGCAGGAGCTAGAGGTTGTAGTGGATTTTTGTGTTGGAACAACTCCAGCCGTAGAAGGGTAAAGGTAAAAGGTACCCCAGTGAGGAAGGTGGGACGCTTTTCATTGTTTGGTGAGTGTGGTAAGTCAAAGAAAAAGAGCTGA 3732 0.4234 MSEMRVSDLHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAAASAWKNNGNSQLHSQLSLPSGSNNGKDKMVFLYNWKNYKSSSEKHNGDDKDEEEEEYDEDGGGNDGSSSLLGSFEDSLSDARNGCDSKSDTCLGVGGSGIRSSIFRCKDANPVALGTPSTRRSLEIKKKSKKSKNAHLDILRKYQQRETNLGKALVNPKHHIHRSIAYSREDSVGQSDDTEDCCNSEDLTRNSGPSPLLLKLKHKNWSRPNSNLLKSNRKEDSSYSTPAMSTSSYNRYGQHNPSTVGSWDGTTTSVNDADDEVDDLLDLPGRQGCGIPCYWSKKTPKHRGMCRSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSLSSSHKRRISSRSAQGVLPLLTNSDDVRGSSPGTGMSDDELSTNYGELDLEGISRLDGRRWSSSCRSQEGWEIVAFNGEGDDEGTSENSRSFSQKYKPMFFSELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTSVARIFAGALNCITPDETKPCGYCRECANFISGKSRDLLEVDGTNKKGIDRVRHLLKRLSVRSSSASSRYMVFVIDECHLLPSKTWLAFLKSLEDLPQRVVFIFITTDLDNVPRTIQSRCQKYLFNKIKDADIVARLRKISAEEKLDVETDALDLIAINADGSLRDAETMLEQLSLLGKRITTSLVNELMGIVSDEKLLELLELAMSSDTAETVKRARELMDCGVDPIVLMSQLASLIMDIIAGSYTVIDDKPGDSFFGGRSLNESELERLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGLMPSDLTQTTTSRRQSSKTTDDDPSSASREVTAHKHKSDAQCMPQKSTSPASLQKAVNRNPSHQRELSSKFDGFSLNSKPLNSPVIDDDAAPVSFDDRTASNVTFRCIDSGKLCDIWAHCIGRCHSKTLKLLLHNHGKLVSICEVEGLLVAYVAFGDADIKLRAERFLSSITNSMEMVLRRNVEVRIIHLLDGEDEDQINLSGPKQPKSIIANEKEHRQGHTRGRDTFSDFPPLLDGNLQSTNDSSDLLVDGNGVRERSDIPMQRIESIIREQRLETAWLQAVGKGSPGSLSRLRPEKNQVLPQEGIYCKDPTESMDSMRFSSQHREDDINHEVKVLKAKNERVLQKDHIGIGRRADCYSMSPSLLHDGSLAGTSIKESLGYESGAGARGCSGFLCWNNSSRRRVKVKGTPVRKVGRFSLFGECGKSKKKS 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0605 1243 MobiDBLite consensus disorder prediction 815 879 - -
Alju03g0605 1243 MobiDBLite consensus disorder prediction 87 119 - -
Alju03g0605 1243 CDD AAA 476 634 - -
Alju03g0605 1243 FunFam DNA polymerase III subunit gamma/tau 638 700 - -
Alju03g0605 1243 MobiDBLite consensus disorder prediction 393 413 - -
Alju03g0605 1243 Gene3D - 453 635 IPR027417 -
Alju03g0605 1243 MobiDBLite consensus disorder prediction 255 302 - -
Alju03g0605 1243 SMART AAA_5 494 656 IPR003593 GO:0016887
Alju03g0605 1243 FunFam DNA polymerase III subunit gamma/tau 457 636 - -
Alju03g0605 1243 MobiDBLite consensus disorder prediction 828 853 - -
Alju03g0605 1243 CDD HLD_clamp_pol_III_gamma_tau 637 700 IPR045085 -
Alju03g0605 1243 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 464 857 - -
Alju03g0605 1243 MobiDBLite consensus disorder prediction 854 879 - -
Alju03g0605 1243 MobiDBLite consensus disorder prediction 393 412 - -
Alju03g0605 1243 Pfam DNA polymerase III, delta subunit 477 637 - -
Alju03g0605 1243 NCBIfam DNA polymerase III subunit gamma/tau 462 811 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Alju03g0605 1243 MobiDBLite consensus disorder prediction 255 303 - -
Alju03g0605 1243 Coils Coil 773 800 - -
Alju03g0605 1243 MobiDBLite consensus disorder prediction 216 243 - -
Alju03g0605 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 687 IPR027417 -
Alju03g0605 1243 Gene3D - 638 700 - -
Alju03g0605 1243 Pfam DNA polymerase III subunits gamma and tau domain III 691 755 IPR022754 GO:0003887
Alju03g0605 1243 SUPERFAMILY post-AAA+ oligomerization domain-like 708 812 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0605 Alju-ChrAlju03 26531161 26538849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0605 458 760 Core DNA Replication Machinery Family AT1G21690 23.718 7.72e-15 75.5