Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0595 ATGGAACTTTCTAGTGAAGAAGGAGAGATCCCAATCCCAATAAACAGTGCCACTAGTTATGGAGGAGGTGGTAATAATGGCCATGGCCACTTGATCCACCACCATCATCATGAGCCTGCAATCCACAGCCACATGATCTCTAATTCCCCAGTACTACCAGTAGCATCAGCGCCGCCCCATAACGGTGTTGGAGGCGGAGGGAGCGGTGGCGGTGGCGACAGCATGGAGGAGGATGATGATCAGCAGCATGGGCCCTACAGCAAGAAACTAGTGGTGAAGTACAGAGAATGCTTGAAGAACCATGCAGCTTCCATGGGAGGAAATGCCACAGATGGTTGTGGTGAGTTCATGCCCAGCGGAGAAGAAGGAACACTAGAAGCCCTCACTTGCTCAGCCTGCCATTGCCACAGAAATTTCCACAGAAAAGAAGTGGAAGGCCAAGGCCATAACGATCAACATCAACAAGATCATCATCTTCTTCTTCATCATCATCAATATCTTCATCATCTTCATAACACTAATAATCATCCTTACAGGTTAGGTGGTAGGAAGCTCCTTCTTCCTCCTCCTGCGCCTGAAACACTGGGCTACCCTACACCACCACCACCACCACCAGGTAACATCTTACCTTCTAGAATGATCATGCCCTACAATGTCATTGGGTCCCACCACTCATCCCTCCCTTCAGACTTATCCGATGAGCAAGATGATCCTCATCATCATCATGGCATAATGAGGTCACATCATCATCAGAATAAGAAGAGGTTCAGGACAAAGTTCACACAGGAGCAGAAGGAGAAGATGCTGAGTTTTGCTGAGAGAGTTGGGTGGAAGATTCAGAAGCAAGAAGAGTCTGTGGTTCAACAGTTTTGTCAAGAGATTGGTGTGAAGAGAAGAGTTCTTAAGGTTTGGATGCACAACAATAAGCACAACCTTGCCAAAAAGATGAATCCCGCAGCAGCAGCTACTACTACTCCTCCTATTACTGCTACTACTATGTCACCACCTTAA 1011 0.4728 MELSSEEGEIPIPINSATSYGGGGNNGHGHLIHHHHHEPAIHSHMISNSPVLPVASAPPHNGVGGGGSGGGGDSMEEDDDQQHGPYSKKLVVKYRECLKNHAASMGGNATDGCGEFMPSGEEGTLEALTCSACHCHRNFHRKEVEGQGHNDQHQQDHHLLLHHHQYLHHLHNTNNHPYRLGGRKLLLPPPAPETLGYPTPPPPPPGNILPSRMIMPYNVIGSHHSSLPSDLSDEQDDPHHHHGIMRSHHHQNKKRFRTKFTQEQKEKMLSFAERVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKMNPAAAATTTPPITATTMSPP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0595 336 MobiDBLite consensus disorder prediction 50 84 - -
Alju03g0595 336 MobiDBLite consensus disorder prediction 224 255 - -
Alju03g0595 336 Gene3D - 240 315 - -
Alju03g0595 336 Pfam ZF-HD protein dimerisation region 92 144 IPR006456 -
Alju03g0595 336 MobiDBLite consensus disorder prediction 1 33 - -
Alju03g0595 336 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 93 144 IPR006456 -
Alju03g0595 336 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 94 143 IPR006456 -
Alju03g0595 336 FunFam Zinc-finger homeodomain protein 2 240 314 - -
Alju03g0595 336 NCBIfam homeobox domain, ZF-HD class 253 309 IPR006455 -
Alju03g0595 336 SUPERFAMILY Homeodomain-like 242 314 IPR009057 -
Alju03g0595 336 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 81 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0595 Alju-ChrAlju03 25990282 25991292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0595 1 320 ZF-HD Transcription Factor Family AT2G02540 45.399 7.16e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju03g0595 ZF-HD_dimer 4.3e-29 No_clan