Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0550 ATGGATGAGAGAGTCGGAAAGAAAAGACCCAAGGTTAACAGGAGCAAGGACTTTATGGATATGCCAGCAAATGATGAAAAGGATCCGGGGCATAGTCTTAAGGTGGAGTCAGATATAGTAAAGAAACGGAAGCATAAAGATAAAAAGAACAAATGCTCAACTGATGAAATGTTGAATTTGAACAAAATCGTTGAGGAAAATTCTACAGGTATAGCAGCCAAGGGACAAGATTGTTCCAGTGAAGGGGATGCCATGAGAAATGGAGAAGAGAACAATAAAAGTAAGAGAAAGAAAAGGAAGAAGGGAAAAGATAAGGATGAAATAATCAGTGGTATCATTGATGGTGATAATAAAATGCAGTTCTTAGATGACAAGCAAGAAAGGAAAAAAAAGAAAAGAAAAAATCGCAACTATTCAATTCCTGAAATGCAAGAAGGATTTGCTTTGGAATTGAGAAGTGAAAACAATGAAGGTGCTAATACTCATTCTGTTGTCACAAACAATGATGATCAAGGGAAGAAGATTAAGAAGAAGGAGAAGGCAAAGGAGAAGGAGAAACTAACTAGCAAAGGCAAAATAATAGAAGATAATGAACTCAGAAACAATGGTGGTGATCGAGCTTCAGCTGAAAGTCATGAAAGCGATCCCCATTTGATAGAAATCAATATGGGGGATGCCATTGAACATGCTAGTTCCACCAAAGGTGATGATCAAGGCAAGAAGAAGAAAATGAAAAAGAAGAGCAAGGAAGATAAACGAGTAACATTTTCTGATCAAGTGGAGGTTTTCAATGATGGCTTAGTGCAAGGGAAAAGGTTTACAAAAGAGGAAGATGAGAAGATTAAAGAGGCTATTTACAGCTATATAGATGCTCATGGGTTGGGTGATCATGGTCAAGGCGTGGATATGATTCTCCATTGCTCATCTTATCCTAAGCTTAGAGGTTGTTGGAAGGAAATTGCATCTGCTTTACCTCACCGACCTCTGGAAAGTGTATATCATCGTGGTCATATTTTGTTTGAAAGGGATGATTCTCGTAAATGGACCCCTGAAGAGTTAGAAATTATACGGAAGTTCCATGAAAAGCATGGACCTAACTGGAAAATGTTGGCTGATGCAATGGGGAAACATCGGTTTCACGTAAAGGATGCATGGCGAAGGATAAAATTAGGAGATGTAAAGAAAGGACACTGGTCACAAGATGAGTATCAGAAGTTATTTAATTTGGTAAATGCTGATCTAAGTATGAGGGCTTTAGAGGAAACTAGAAAATATAAACATGGTATGTTGCGAGATAATATATGTTGGGAGGCAATTGGTAACAAGGTGGCTACTAGAACCAGTCAACTTTGCTGTATGAAGTGGTATGAAAAGTTAACATCTCCCATGGTTGCAGAAGGTGAATGGGCTGATACCGATGACTACCGCCTGCTTAATGCTTTATATACACTGGATGCCTGCAGCATGGAGGAGGTGGAATGGGATCATTTGCTTGAGCATAGGTCTGGTGATGTATGTAGAAAACGATGGAATCAAATGGTTCAGCATATTGGAGAGAATGGGATTAAGTCATATTCTGAGCAAGTGGAAATTCTGTCTCAGAGATATTGTCCTGACTTAGTGGAAGCGAGGGAAGCCTTCGATAGCAAGCCTGTGGTCCCTTGA 1665 0.3934 MDERVGKKRPKVNRSKDFMDMPANDEKDPGHSLKVESDIVKKRKHKDKKNKCSTDEMLNLNKIVEENSTGIAAKGQDCSSEGDAMRNGEENNKSKRKKRKKGKDKDEIISGIIDGDNKMQFLDDKQERKKKKRKNRNYSIPEMQEGFALELRSENNEGANTHSVVTNNDDQGKKIKKKEKAKEKEKLTSKGKIIEDNELRNNGGDRASAESHESDPHLIEINMGDAIEHASSTKGDDQGKKKKMKKKSKEDKRVTFSDQVEVFNDGLVQGKRFTKEEDEKIKEAIYSYIDAHGLGDHGQGVDMILHCSSYPKLRGCWKEIASALPHRPLESVYHRGHILFERDDSRKWTPEELEIIRKFHEKHGPNWKMLADAMGKHRFHVKDAWRRIKLGDVKKGHWSQDEYQKLFNLVNADLSMRALEETRKYKHGMLRDNICWEAIGNKVATRTSQLCCMKWYEKLTSPMVAEGEWADTDDYRLLNALYTLDACSMEEVEWDHLLEHRSGDVCRKRWNQMVQHIGENGIKSYSEQVEILSQRYCPDLVEAREAFDSKPVVP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0550 554 MobiDBLite consensus disorder prediction 154 168 - -
Alju03g0550 554 SUPERFAMILY Homeodomain-like 439 517 IPR009057 -
Alju03g0550 554 MobiDBLite consensus disorder prediction 229 252 - -
Alju03g0550 554 ProSiteProfiles Myb-like domain profile. 461 514 IPR001005 -
Alju03g0550 554 MobiDBLite consensus disorder prediction 1 54 - -
Alju03g0550 554 MobiDBLite consensus disorder prediction 103 128 - -
Alju03g0550 554 PANTHER GB|AAC33480.1 24 554 - -
Alju03g0550 554 Pfam Myb-like DNA-binding domain 348 406 - -
Alju03g0550 554 CDD SANT 347 376 IPR001005 -
Alju03g0550 554 Gene3D - 349 387 - -
Alju03g0550 554 MobiDBLite consensus disorder prediction 169 215 - -
Alju03g0550 554 ProSiteProfiles Myb-like domain profile. 390 459 IPR001005 -
Alju03g0550 554 Gene3D - 388 463 - -
Alju03g0550 554 ProSiteProfiles Myb-like domain profile. 347 389 IPR001005 -
Alju03g0550 554 SMART sant 344 391 IPR001005 -
Alju03g0550 554 SMART sant 394 461 IPR001005 -
Alju03g0550 554 SMART sant 269 342 IPR001005 -
Alju03g0550 554 SMART sant 465 516 IPR001005 -
Alju03g0550 554 SUPERFAMILY Homeodomain-like 346 406 IPR009057 -
Alju03g0550 554 MobiDBLite consensus disorder prediction 68 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0550 Alju-ChrAlju03 23862977 23864641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0550 348 515 MYB Transcription Factor Family AT5G02320 23.256 6.40e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju03g0550 Myb_DNA-bind_6 2e-11 CL0123