Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0543 ATGGCAACTTTGTTCAGCTCAATCTTATTATTATCATCTCTTCTTCTGGTTGTTCCATTATTATTTTTCTCTTTGGCTTCTGGCTATTCTTTTAATGAGGTCAAATTATGGTGTAGCCAAACCCCTAATCCTCAACCATGTGAGCATTTCTTGAACCAAAAACCTTCCTACCAATACAAACCCATAAACAACAAAGATGATTTCTTCAAACTTTCTCTACAGCTCGCCCAGGAACGAGCTCTGGTCGGCCACGCAAACGCTGTTTCGCTCGGCCCAAAGTGCCGGAACCAAAGGGAAAAACTTGCCTGGGCTGATTGCCTAGAGTTGTATGAGCACACAATACTCAAACTCAACAAAACCCTAAATCCTAACACCAAGTGCACCCAAAGTGATACTCAAACATGGCTCAGCTCAGCCCTCACAAATCTTGAGGCATGTAAAGCTGGCTTTTATGAACTTGGGGTTCAAGACTATGTGTTGCCTTTGATGTCCAACAATGTTACCAAGTTGCTAAGCAACACTTTGGCTCTAAACAAGGTTCCATATGATGAACCAAGTTATAAAGATGAGTTCCCAACTTGGGTCAAGCCGGGTGACAGGAAGCTGTTGCAGAGTTCTTCTCCATCTTCTCAGGCGAATGTCGTGGTGGCTAAAGATGGTTCCGGCCACTTCACAACAGTTAGTGCCGCCATAAGTGGTGCACCAGAGAGTAGCAGTGGGAGGTATGTTATATATGTGAAGACAGGAATATACAACGAACAAGTTGATATAAAACTCAACAATATCATGTTAGTTGGAGATGGTATTGGAAAAACTATCATTACTGGTAGCAATAGTGTTGGAGGAGGCACCACTACGTTCCGTTCTGCAACTGTTGGTCCAATTGCTGTAATAGTGTCTTGTGTTTTTATTTATAATCTTTAG 924 0.4232 MATLFSSILLLSSLLLVVPLLFFSLASGYSFNEVKLWCSQTPNPQPCEHFLNQKPSYQYKPINNKDDFFKLSLQLAQERALVGHANAVSLGPKCRNQREKLAWADCLELYEHTILKLNKTLNPNTKCTQSDTQTWLSSALTNLEACKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVPYDEPSYKDEFPTWVKPGDRKLLQSSSPSSQANVVVAKDGSGHFTTVSAAISGAPESSSGRYVIYVKTGIYNEQVDIKLNNIMLVGDGIGKTIITGSNSVGGGTTTFRSATVGPIAVIVSCVFIYNL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0543 307 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 180 IPR035513 -
Alju03g0543 307 Gene3D - 207 305 IPR012334 -
Alju03g0543 307 Pfam Pectinesterase 213 293 IPR000070 GO:0030599|GO:0042545
Alju03g0543 307 NCBIfam pectinesterase inhibitor domain 12 180 IPR006501 GO:0004857
Alju03g0543 307 CDD PMEI-like_3 36 179 - -
Alju03g0543 307 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 181 IPR035513 -
Alju03g0543 307 PANTHER PECTINESTERASE 16 293 - -
Alju03g0543 307 SUPERFAMILY Pectin lyase-like 208 296 IPR011050 -
Alju03g0543 307 ProSitePatterns Pectinesterase signature 1. 238 257 IPR018040 -
Alju03g0543 307 SMART PMEI_2 29 177 IPR006501 GO:0004857
Alju03g0543 307 Pfam Plant invertase/pectin methylesterase inhibitor 33 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0543 Alju-ChrAlju03 23520003 23521823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0543 15 296 Carbohydrate Esterase AT2G45220 58.304 2.29e-117 345