Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0541 ATGAGCCAAAAGATCATCAAACACAAACATGATTTTCTCAATCTTTCGCTTCAACTAGCCCAAGAGCGAGCCCTAAAAGGTCATGCTAACACTCTTTCATTAGGCCCCAAGTGTAGGAACTCGCGTGAGAAAGCTGCATGGGTTGATTTCATTGAGCTTTACGAGCAAGCCATCCATAAGCTCAACAAAACCCTAGACCCCACCCACACCATGTTCTCTCAGGCAGATGCTCAAACATGGCTCAGCACAGCTCTCACCAACCTCGAGACGTGCCGAGCAGTGTTCTATGAGCTCGGGGTTCAAGACTACGTGTTGCCTTTGATGTCCAACAACGTCACTAAGTTGTTGAGCAACACTTTGGCTTTGAACAAAGTTGAATACAAAGAGCCAAGTAATAAAGATGGGTTTCCAACATGGGTTAAGCCTGGGGATAGGAAGTTGTTGTAG 447 0.4609 MSQKIIKHKHDFLNLSLQLAQERALKGHANTLSLGPKCRNSREKAAWVDFIELYEQAIHKLNKTLDPTHTMFSQADAQTWLSTALTNLETCRAVFYELGVQDYVLPLMSNNVTKLLSNTLALNKVEYKEPSNKDGFPTWVKPGDRKLL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0541 148 SMART PMEI_2 1 122 IPR006501 GO:0004857
Alju03g0541 148 Pfam Plant invertase/pectin methylesterase inhibitor 10 122 IPR006501 GO:0004857
Alju03g0541 148 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 9 125 IPR035513 -
Alju03g0541 148 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 125 IPR035513 -
Alju03g0541 148 NCBIfam pectinesterase inhibitor domain 10 124 IPR006501 GO:0004857
Alju03g0541 148 CDD PMEI-like_3 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0541 Alju-ChrAlju03 23371278 23371798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0541 6 148 Carbohydrate Esterase AT2G45220 60.417 1.26e-56 182