Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0471 ATGTGCAGCAGCATCCTTGGCTCAATCATGGACAACAATTATCATCAGGGCGATTTAACTGACATATTCCGTGCAAGCGGCGGCGGCGGCGGCCGAGGTGGAGGTGGTGGTGGTGGTGGTTCATATGGCACTTCTTCTTCTTCAACATCTGAATTAGCTCCCCATGATCTCTCTTCTTCTTCATCGGAAAGTTGGCACCACCAGCACCATCAGCAACACCACCAGATGAATTTCTCTTCTGTAATGATGGAAGATTCTCTGAGAGCCGCCAACTTCTTCGGCGATCCCTTCTCGAACATGCGAGATCCCTTTCTTCATGACCTTGAATTCCACTTACCTTCTTCTTACTTCAGTTCTGCTCCTAATAATTCTTCCATGGAAGGTGCATCCCCTGGCTTTTCTGCTTCTTCTTCTGTTGTTTTGTCTCATCATGATAATATGAGAATTAGGCCTCCTCCTTTAGCATCAGGTAACACCACCACCACCATATTCTCCAACATGATTCAGATCTCTCCCAACGCCGCCGCCGCCAAGTTACCGGTTTCGCTGTGCGATTCTCCTCCGGTGAATATGGCCACCGTGAATTCTTCCTCTTCATCATCGTTGCTGTTGTCGTCGCCGAGGGGAATTGAGCCTTCTTCTTCTTCTTCTTTGGTTTCCGCGGGCAACATGAATATCACTGTGGACAACGCAGCAGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTCAAACGAAGAAAGAGTCAGGCGAAGAAGGTGGTATGTATACCTGCACCAGCAGCTGCAAATAGCAGACCAAGTAGTGGGGAGGTAGTTCCTTCTGATTTGTGGGCTTGGCGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCTTACCCAAGGGGTTACTACAGATGTAGCAGCTCCAAGGGTTGTTCAGCAAGAAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACCTCAGAGCACAACCATCCATGGCCGACTCAACGAAACGCTCTCGCCGGCTCAACAAGGTCTCAGCCTTCCAAAAACAACAACAACAACGCTCTCAAGAACAACAACAACAACAACTACAATTCCGATAATCAGGCTTTGATTCGGCCGCCAAATCCAAAGGAGGAGGAGGAGGATCATCAAGAGCAGCAGCAGAGAGGGAAAATTAGCTCTTCATCATCAGTGAAGGAGGAGATGGAAATGGAAGAGAATAATGATCAAGAAGAGCTTGAGAATATGATGATGGAAGATGATAATAATGGATCTGAAGGTGGAGGAGTGGGATACAAGCCATGTATGTTGGATCAGAGCAATGATAATAATAATCAGACTTCTGAGGATTTCTTTGCAGAATTGGGAGAGATAGAAGCTGACCCACTGAATCTCTTGTTCACTCAAGCAGGTTACAATGAAGAGAATCATCATCATCAGAGAGAATCCAAAGCTTTAGATCCTTTCAGTAATCTCTTTATTGACTGGTCATCATCATCTTCTACATCAGCATCAGCAGCTCATATTCACAACACCACCACCACTTCATTTGAAGAACAAAAGAGAGGGTTATAA 1581 0.463 MCSSILGSIMDNNYHQGDLTDIFRASGGGGGRGGGGGGGGSYGTSSSSTSELAPHDLSSSSSESWHHQHHQQHHQMNFSSVMMEDSLRAANFFGDPFSNMRDPFLHDLEFHLPSSYFSSAPNNSSMEGASPGFSASSSVVLSHHDNMRIRPPPLASGNTTTTIFSNMIQISPNAAAAKLPVSLCDSPPVNMATVNSSSSSSLLLSSPRGIEPSSSSSLVSAGNMNITVDNAAVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNNALKNNNNNNYNSDNQALIRPPNPKEEEEDHQEQQQRGKISSSSSVKEEMEMEENNDQEELENMMMEDDNNGSEGGGVGYKPCMLDQSNDNNNQTSEDFFAELGEIEADPLNLLFTQAGYNEENHHHQRESKALDPFSNLFIDWSSSSSTSASAAHIHNTTTTSFEEQKRGL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0471 526 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 85 469 IPR044810 GO:0003700
Alju03g0471 526 Gene3D WRKY domain 246 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g0471 526 Coils Coil 401 423 - -
Alju03g0471 526 MobiDBLite consensus disorder prediction 504 526 - -
Alju03g0471 526 Pfam WRKY DNA -binding domain 275 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g0471 526 MobiDBLite consensus disorder prediction 317 373 - -
Alju03g0471 526 MobiDBLite consensus disorder prediction 290 411 - -
Alju03g0471 526 MobiDBLite consensus disorder prediction 375 390 - -
Alju03g0471 526 ProSiteProfiles WRKY domain profile. 268 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g0471 526 MobiDBLite consensus disorder prediction 40 61 - -
Alju03g0471 526 SUPERFAMILY WRKY DNA-binding domain 271 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju03g0471 526 MobiDBLite consensus disorder prediction 25 74 - -
Alju03g0471 526 SMART WRKY_cls 273 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju03g0471 526 FunFam probable WRKY transcription factor 14 246 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0471 Alju-ChrAlju03 17406152 17409646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0471 1 478 WRKY Transcription Factor Family AT2G34830 40.514 2.72e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju03g0471 WRKY 3.1e-25 CL0274