Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0468 ATGTTAGCCGATCAGAGTGCTATTGGTTATGATCGATATGCACCCAACAAGGAAGACAAGAAGGATACTTCATACATGGCAGTAAATGCAGAGCCAAATGCTGAGAATGCCTATTCCAACTTTAAAGGACTCCTTGCGCTTTCTAAAATATCAAGAAGAACATACTATGATCATTTGTTAGAGCCACCGTATGCGAGGAGCGGTAGTGCCGCTTCTAGTGATGTTGCTCAACTGCTACTTAATAACTACAATGACATCGTTTTCTCTCATGGCTTTGCTACTACCACCTTCTCTCATTCAAACCTTATTATTACTACTGCTTCTGCTTTAGAAAAGGGATCGGTTGGATTTGATGATATGGCCAACAACAATAGATGCCCAAGACAAGAAACTCTTTTGCTCTTAGAGATCAGATCTCGTCTTGAATCTAAGTTCAGAGAGACCAATCAAAAGTCCCCCTTATGGAATCAAATTTCTAGGATAATGACTGAAGAATATGGGTACCATAGAAGTGGGAAAAAATGCAAAGAGAAATTTGAGAATTTGTACAAGTACCAGGGAAGGGAAAGCAGGAAGACAAGATGGGAAACATTGCAAGCTGTTCTTTCATCAGATTGA 618 0.3981 MLADQSAIGYDRYAPNKEDKKDTSYMAVNAEPNAENAYSNFKGLLALSKISRRTYYDHLLEPPYARSGSAASSDVAQLLLNNYNDIVFSHGFATTTFSHSNLIITTASALEKGSVGFDDMANNNRCPRQETLLLLEIRSRLESKFRETNQKSPLWNQISRIMTEEYGYHRSGKKCKEKFENLYKYQGRESRKTRWETLQAVLSSD 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0468 205 CDD GT1 124 185 - -
Alju03g0468 205 FunFam Trihelix transcription factor GT-2 126 188 - -
Alju03g0468 205 PANTHER FI21293P1 116 191 - -
Alju03g0468 205 Gene3D - 127 188 - -
Alju03g0468 205 Pfam Myb/SANT-like DNA-binding domain 128 189 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0468 Alju-ChrAlju03 17010180 17016071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0468 125 185 Trihelix Transcription Factor Family AT5G03680 77.049 7.49e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju03g0468 Myb_DNA-bind_4 5.6e-12 CL0123