Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0465 ATGATACAAAAATTTGGGACTCGACTCTTTGTGAGCAGATTGTCATTCTTCACAACAGTTAGCCACCTCAGAAATCTGTTTTCTCCTTTTGGAAAAATTACAGAAGCTTGTCTAGTGAAGGACCCAAAAACTCAAAGGCCTAAAGGATTTGGGTTTGTCTCCTATGAGTCAGAAATTGAAGCAGAGAGGGCTATGAATGCCATGAATGCCAGGGTAAGACTCTAA 225 0.4044 MIQKFGTRLFVSRLSFFTTVSHLRNLFSPFGKITEACLVKDPKTQRPKGFGFVSYESEIEAERAMNAMNARVRL 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0465 74 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 74 IPR000504 GO:0003723
Alju03g0465 74 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 71 IPR000504 GO:0003723
Alju03g0465 74 SMART rrm1_1 8 73 IPR000504 GO:0003723
Alju03g0465 74 Gene3D - 3 72 IPR012677 -
Alju03g0465 74 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 8 71 - -
Alju03g0465 74 SUPERFAMILY RNA-binding domain, RBD 7 69 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0465 Alju-ChrAlju03 16477252 16477649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0465 7 72 Eukaryotic Initiation Factors Gene Family AT4G34110 31.818 2.80e-07 43.9