Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0437 ATGAGGAAACTAATTACTATGGGTGATGTCTGCACTGATGAATCACATATTGGACCACACACTATGGATGCGATAACCTATTTGAGAGCAGTGAAAGCAACATTTGAAAGCGACAGCGAAACAGGAAGATATGATATGTTCGTTTCAATCTTAAAAGATTTCAAGAACCTAAGGAGTGAAGTTGCAGATTTCTCAGCAAGGATGAAGGAAATATTGAGAGGGCACGACTTTTTGATTTTGGGATTAAACGTCTTCATGCCCGAAGGATACGATATAACTCTTTCTTATGATTATCAAACTTTCAAAGGGCAAAAGAGGCAAAGGAATGAGAAGCCTCTTAACAATGTGAAAAATGCTAATAAGTTCAAGAAGCCTAAGATGAATGAAACTAAACCAGTTCAAGAAACTGGTCTCAATAATCATAAGGCTATTAATGAAAATAATCAAAAGACTGATGATTTGATGCCCAAAGAAGTAGATCTCAACAAATGTGAACGTTATGGCAACAGCTACGTGTGTTTGCCTGAAGATTACAAGAGTCCTATAGCCAGTGGGAGATCTAAGCTTGCAGCTTCAGTGTTGAATGATCGTTTCTTGTTGAACCCACCACGCCAGGATGATCATCAAGGTTGTTCAAAAGGCAAGAAAATGATCAATAAGAGTCGGGAAGAACTGTTCAAGGTTGAAGAAGAACAATTTGAAGCGGACATGTTATTAGAGTCTCTAAGCTCAACCTGCGAACGTTTCAAGGAAGTGTATCAAAACATACTTGAGAATGTGGAGGGTTCTCTTCGTATTGAAGATTGCTTTACGACTTCACATTTGAGATCGATTGAGCATATGTACGGTAAGCATGGTCTTGAAGCTTTGGAGGCATTACGCAACAACCCAACTGTTGCTGTGCCTTTGATGTTGGGGCGTCTTGAAGAGAAACTTGAGCAATTGAAGCCCATTCATCTAGAACTCAAAAAGGTTTGGGCTCAAGTTTATGCCAACAACCACGCCGAATCACTTGCTTTTCGATCCAAGCCTACTTAG 1038 0.3969 MRKLITMGDVCTDESHIGPHTMDAITYLRAVKATFESDSETGRYDMFVSILKDFKNLRSEVADFSARMKEILRGHDFLILGLNVFMPEGYDITLSYDYQTFKGQKRQRNEKPLNNVKNANKFKKPKMNETKPVQETGLNNHKAINENNQKTDDLMPKEVDLNKCERYGNSYVCLPEDYKSPIASGRSKLAASVLNDRFLLNPPRQDDHQGCSKGKKMINKSREELFKVEEEQFEADMLLESLSSTCERFKEVYQNILENVEGSLRIEDCFTTSHLRSIEHMYGKHGLEALEALRNNPTVAVPLMLGRLEEKLEQLKPIHLELKKVWAQVYANNHAESLAFRSKPT 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0437 345 Pfam Sin3 family co-repressor 165 258 IPR013194 -
Alju03g0437 345 Gene3D Paired amphipathic helix 23 87 IPR036600 GO:0006355
Alju03g0437 345 ProSiteProfiles PAH domain profile. 18 89 IPR003822 GO:0006355
Alju03g0437 345 SMART hdac_interact2seq4b 163 266 IPR013194 -
Alju03g0437 345 MobiDBLite consensus disorder prediction 126 148 - -
Alju03g0437 345 PANTHER SIN3B-RELATED 21 111 IPR039774 GO:0003714
Alju03g0437 345 SUPERFAMILY PAH2 domain 20 87 IPR036600 GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju03g0437 Alju-ChrAlju03 15346063 15347246 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0437 18 94 WRKY Transcription Factor Family AT4G12020 42.857 1.27e-11 64.3