Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0304 ATGTCTTCCATGGATCCTGGATCGTCGTCCTCCTCTTATCCCAACCAACCTGCTTCTCTCAAAAATATTAATGTAAATGCGAGTGCAAATGTGGGTTCTGATGCGAAAGAAGGGAACTCTCCTCGTCATGCACAGGCTAATGGAATGCAGGGGGAATCCAAATTAGAATTGTTTGGTTTTGATTCTCTTGTCAACATTCTTGGGCTCAAAAGTATGACTGGAGAGCAGCTTCAACAGCCATCTAGTCCAAGAGGTGGTGAGAATATTTCCATCACAGTGGGGCAGCCAAGGCCTGCAGGCCCCCAATTGGGAACATTGATGGGTGTGTTCATTCCGTGCTTACAAAGCATATTGGGAATTATCTATTACATTCGGTTCTCTTGGATTGTTGGTATGGCTGGCATAGCAGAGTCATTGTTACTTGTTACTCTATGTGGCTCCTGTACTTTTCTTACCTCAATATCGCTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGGCCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGGGTTAGCATTGGTCTTTGTTTCTTTCTGGGGAATGCAGTTGCTGGAGCCCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGAAAGCAGTGCCTAGAGCTGGGATTTTTGGAGAGACTATCACACAAGTTAATGGTACTGCCGTTGCAGAACCAATACACGTTATAAGTTCTCATGATATGCAAATTTATGGAATTGTTGTGACTATCGTATTATGCTTTATTGTATTTGGAGGTGTAAAGATGATTAATCGGGTTGCGCCTGCTTTTCTTATACCTGTTTTGTTCTCACTGTCCTGCATATTTATGGGGATCTTCTTGGCAAGAAAGGATAAGCCTGCAGAGGGAATCACGGGACTGAGTTTGGAGACATTTAAAGAAAATTGGAGCTCAGAGTATCAAAACACTGATGCCAATGGAATTCCAGATCCTAATGGATCTGTAAGCTGGGGTTTTAATTCATTGGTTGGGCTCTTTTTCCCAGCTGTGACGGGAATAATGGCAGGTTCAAATCGATCATCATCTCTGAAAGATACTCAGCGTTCAATTCCTGTTGGAACCTTAGCTGCTACTCTTTCGACAACTTCTATGTATCTAATTACTGTTTTCTTGTTTGGTTCTGTTGCAACCAGAAACAAGCTATTAACAGATAGGCTACTCACAGCTACCATTGCCTGGCCTTTTCCATCATTAATCAAAATTGGGATTATTCTTTCAACTCTGGGTGCTGCTCTTCAGAGCTTGACAGGGGCCCCACGTTTACTTGCAGCAATAGCCAATGATGATATATTACCTGTTCTTAACTACTTCAAAGTTGTGGATGGCAGTGAGCCTTACCTTGCAACACTTTTCACGGCTTTCCTCTGTATTGGGTGTGTCATAATTGGGAATCTGGATCTTATCACTCCAACAATAACTATGTTCTTCCTTCTATGTTATGCGGGTGTCAACTTGTCCTGCTTCCTTCTGGATCTTCTAGATGCTCCTAGTTGGCGTCCTCGGTGGACTTTTCACCATTGGAGCTTGTCTCTTTTTGGTGCATTACTTTGTGTAGTTATCATGTTCCTGATCTCTTGGTCATTCACTGTGGTATCTTTAGCTCTTGCAAGCCTTATATACAAGTATGTCAGTCTCAAAGGAAAGGCTGGGGACTGGGGAGACGGTTTTAAAAGTGCATATTTCCAATTAGCACTTCGCAGCCTTAGGTCACTTGGAGCAAACCAAGTGCACCCAAAGAATTGGTATCCGATCCCTTTAATATTCTGCCGACCTTGGGGCAAATTGCCAGAAAATGTACCTTGCCATCCCAAACTGGCAGACTTTGCCAACTGCGTGAAAAAAAAGGGTAGGGGAATGTCCATATTTGTCTCTATACTGGATGGTGACTACCATGACTGTGCTGAAGATGCCAAGGTTGCTTGCAGACAACTAAGTACCTACATTGATTACAAGAATTGCGAAGGTGTTGCTGAGATAGTCGTAGCCCCCAATATGTCAGAAGGCTTTCGTGGTATTGTACAGACTATGGGCCTTGGCAATCTTAAGCCAAACATCGTTGTGATGCGATATCCAGAAATATGGCGACGTGAGAACTTGACAGAGATCCCGGCAACCTTTACTGGGATAATTAATGACTGCATCGTAGCAAACAAAGCAGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCTAATGAGTACCAGAAGCAGTACGGCACGATTGATTTGTATTGGATTGTGAGAGACGGTGGTTTAATGCTTCTTCTCTCCCAGCTTCTTCTTACAAAGAACAGCTTTGAGAGTTGCAAGATTCAAGTTTTTTGCATTGCGGAAGAGGATGCAGATGCAGAGGTGCTGAAGGCTGATGTGAAGAAGTTTCTTTATGATCTTCGGATGCAGGCAGAAGTCTTTGTCATAACAATGAAATGGGATGCACAAACGGATGGTGGTGAGTCTCAGCAAGACGAATCATATGAGGCATTTACTAGCGCGCAGCGAAGAATCAGTGATTACTTAGCCGAAATGAAGGCAAGAAAGCGGGACGATGCCCCTCTAATGGCTGATGGTAAGCCGGTGGATGTGAATGAGAAGCAGGTGGAGAAGTTTCTCTACACAACATTGAAGCTGAATTCTATAATGCTGAAGTACTCAAGAATGGCAGCAGTTGTACTGGTAAGCTTGCCTCCACCTCCATTGAACCACCCTGCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAGGGTACCCAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTTACTCTATTCACATAG 2850 0.4365 MSSMDPGSSSSSYPNQPASLKNINVNASANVGSDAKEGNSPRHAQANGMQGESKLELFGFDSLVNILGLKSMTGEQLQQPSSPRGGENISITVGQPRPAGPQLGTLMGVFIPCLQSILGIIYYIRFSWIVGMAGIAESLLLVTLCGSCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPRAGIFGETITQVNGTAVAEPIHVISSHDMQIYGIVVTIVLCFIVFGGVKMINRVAPAFLIPVLFSLSCIFMGIFLARKDKPAEGITGLSLETFKENWSSEYQNTDANGIPDPNGSVSWGFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLSTTSMYLITVFLFGSVATRNKLLTDRLLTATIAWPFPSLIKIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVVDGSEPYLATLFTAFLCIGCVIIGNLDLITPTITMFFLLCYAGVNLSCFLLDLLDAPSWRPRWTFHHWSLSLFGALLCVVIMFLISWSFTVVSLALASLIYKYVSLKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCVKKKGRGMSIFVSILDGDYHDCAEDAKVACRQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFTGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKNSFESCKIQVFCIAEEDADAEVLKADVKKFLYDLRMQAEVFVITMKWDAQTDGGESQQDESYEAFTSAQRRISDYLAEMKARKRDDAPLMADGKPVDVNEKQVEKFLYTTLKLNSIMLKYSRMAAVVLVSLPPPPLNHPAYFYMEYMDLLLERVPRILIVRGYRRDVVTLFT 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0304 949 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 71 946 IPR004842 GO:0006811|GO:0015377|GO:0016020
Alju03g0304 949 NCBIfam K-Cl cotransporter 39 949 IPR004842 GO:0006811|GO:0015377|GO:0016020
Alju03g0304 949 Pfam Solute carrier family 12 618 739 IPR018491 GO:0006811|GO:0016020|GO:0022857
Alju03g0304 949 Pfam Solute carrier family 12 750 948 IPR018491 GO:0006811|GO:0016020|GO:0022857
Alju03g0304 949 Gene3D Amino acid/polyamine transporter I 102 566 - -
Alju03g0304 949 FunFam Cation-chloride cotransporter 1 102 566 - -
Alju03g0304 949 MobiDBLite consensus disorder prediction 1 48 - -
Alju03g0304 949 Pfam Amino acid permease 108 584 IPR004841 GO:0016020|GO:0055085
Alju03g0304 949 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0304 Alju-ChrAlju03 10633532 10651139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0304 103 949 Inorganic Solute Cotransporters AT1G30450 82.783 0.0 1443