Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0299 ATGAGACTATCTTCATCTGGTTTTAGCCCTCCACCTCCGGAAGGAGAAAAGCGAGTCCTGGATTCAGAACTTTGGCATGCATGTGCTGGCCCTCTTGTTTCCTTACCAGCAGTTGGAAGTCGTGTCGTCTACTTTCCTCAAGGTCACAGTGAACAGGTTGCTGTGTCTACCAACAAGGAAGTGGATGCCCATATTCCTAATTACCCTAGCTTGCCTCCGCAGCTTATTTGTCAGCTTCATAATGTGACCATGCATGCGGATGTGGAGACAGATGAAGTATACGCGCAGATGACCTTGCAAGCTCTAAATCCTCAAGAGCAGAAAGAGGCGTACCTTCCAGCAGAGTTGGGCACTCCTAGTAAGCAGCCAACCAATTACTTTTGCAAAACTTTGACGGCCAGTGACACAAGCACACATGGGGGTTTCTCTGTTCCCCGCCGAGCAGCTGAGAAAGTGTTTCCCCCACTGGACTTCTCCCAACAACCTCCTTGTCAAGAGCTAATTGCTAGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTTCGTGGTCAACCCAAACGGCATCTACTTACAACTGGATGGAGTGTGTTTGTGAGTGCTAAAAGGCTTGTTGCTGGTGATTCAGTTCTGTTTATCTGGAATGAAAAGAATCAGTTGCTTCTTGGTATCCGGCGTGCAAATCGTCCACAAACTGTGATGCCTTCATCAGTGTTATCAAGTGACAGCATGCACCTGGGGCTTCTTGCTGCTGCTGCTCATGCTGCTGCAACAAACAGTCGTTTTACCATTTTCTATAATCCACGCGCTAGCCCATCTGAATTTGTCATACCCTTAGTCAAGTATGTGAAAGCTGTGTATCATACTCGAGTCTCAGTTGGTATGCGCTTCAGGATGCTGTTTGAAACTGAGGAATCAAGCGTGCGGAGATACATGGGCACCATAACTGGTATCAGTGACCTGGATCCTGTTCGATGGCCAAATTCACATTGGCGATCAGTCAAGGTTGGCTGGGATGAATCTACAGCAGGAGAGAGGCAACCTAGGGTGTCCCTATGGGAAATTGAGCCATTAACAACATTTCCGATGTATCCATCATCTTTTCCTCTTAGGCTTAAACGGCCATGGCCTCTGGGATTACCTTCTTTCCAGGGCATGAAGGATGACAGTTTTAGCTTAAGTAATCAACTGTTATGGCTTCGAGACACCACAGACCGAGGTCTCCAGTCTCTTAACTTCCAGGGGTTTGGGTTCAATCCTTGGATGCAGCCAAGGCTTGATCCCTCCATGTTGACTTCACCAACTGACATGTACCAAGCCATGGCTAATACTGCAGTTCAGGATATGAGGACTTTGGATCCTTCCAAGCCGTATCCGGCATCTTTTCTTCAATTTCAGCAGCAACAGAACTTCCCCAATAGGACTACTGCTTTAATGCAGGCCCAAATGTCCCATCAGTCTCAACTGCAGCAGGCTTGTCAAAGCAATCAAGAGAATCAGAATTCTTCTCAATCCTTGGCTTCAACTCAGATGCAACTTCAGCAGCAGCACTCGTTCAATAATAATCAGCATCAGCATCATCAGCCGCAGCAAGTGGTTGATCATCAGCAGATTTCAAGTGCTTCTGCAATGTCTCAGTTTGCATCTCCTCCACAACCCCATTCACCATCCATGCAAGCTATGTCTTCGCTTTGCCAACAACAGAACTTTTCTGAAACAAATGTGAATTCCATGAATGCGTCCATGGTTTCTCCCTTGCACAGTATCTTGGGTTCATTTTCCCAGGATGAATCATCCCACCTTCTCAACCTACCCAGGACTAGCTCTTGGGTACCTGTTCAATCATCTAGTGCCTGGCCCTCCAAGCGTGTTGCAGTCGATCCTCTACTTTCTTCTGGAGCTTCTCAGTGCACTCTGCCTCAGTTGGAGTTGTTAGGGCAGCCACAAAGTACTATGTCACAGAATGTTATTTCGTTGCCACCTTTTCCTGGTCGGGAGTGTTCAATAGACCAAGAAGGGAGCACCGATCCTCAGAACAATCTTTTATTTGGTGTTAATATAGAGCCCTCATCTCTTATAGTGCAGAATGGGATGCCGAGCCTTAAGGGAGTTGGCAACAACAACGACTCTGGGATTGCGCCGTTTCAGTCATCTAATTACCTGGATGCTACAGGAACCGATTCATCATTGAATCATGGAATTACACACAGCATTGCCGAATCGAACTTCCTTGAGATTCCAGATAATGGAGGTCAAGGAGACCCACAAAACAAAACCTTTGTCAAGGTTTACAAGTCAGGGTCCTGCGGAAGATCATTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGTGGTGAACTTGCCCGAATGTTTGGCCTTGAAGGCAAGTTAGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGACGTTCTTCTCCTCGGTGATGGCCCCTGGCCGGAATTCGTAAATAGTGTATGGTGTATCAGAATACTTTCTCCCCAAGAAGTGCAGCAAATGGGCAACAATGGGCTTGAACTTCTGAACTCGGTCCCAATTCAGAGGCTCTCTAATGGCGTCTGTGATGACTACGTGAGCCGCCCTGACCCAAGAAATTTAGGCACTGGGGTAGCAACCAATGGTGTGACAATCTAG 2676 0.4705 MRLSSSGFSPPPPEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQALNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPLGLPSFQGMKDDSFSLSNQLLWLRDTTDRGLQSLNFQGFGFNPWMQPRLDPSMLTSPTDMYQAMANTAVQDMRTLDPSKPYPASFLQFQQQQNFPNRTTALMQAQMSHQSQLQQACQSNQENQNSSQSLASTQMQLQQQHSFNNNQHQHHQPQQVVDHQQISSASAMSQFASPPQPHSPSMQAMSSLCQQQNFSETNVNSMNASMVSPLHSILGSFSQDESSHLLNLPRTSSWVPVQSSSAWPSKRVAVDPLLSSGASQCTLPQLELLGQPQSTMSQNVISLPPFPGRECSIDQEGSTDPQNNLLFGVNIEPSSLIVQNGMPSLKGVGNNNDSGIAPFQSSNYLDATGTDSSLNHGITHSIAESNFLEIPDNGGQGDPQNKTFVKVYKSGSCGRSLDITKFSSYHELRGELARMFGLEGKLEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIRILSPQEVQQMGNNGLELLNSVPIQRLSNGVCDDYVSRPDPRNLGTGVATNGVTI 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0299 891 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Alju03g0299 891 Coils Coil 890 891 - -
Alju03g0299 891 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 848 IPR044835 GO:0003677|GO:0006355|GO:0009725
Alju03g0299 891 Gene3D - 291 363 - -
Alju03g0299 891 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Alju03g0299 891 MobiDBLite consensus disorder prediction 490 565 - -
Alju03g0299 891 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Alju03g0299 891 Gene3D - 755 848 - -
Alju03g0299 891 FunFam Auxin response factor 291 363 - -
Alju03g0299 891 FunFam Auxin response factor 754 848 - -
Alju03g0299 891 FunFam Auxin response factor 125 229 - -
Alju03g0299 891 SUPERFAMILY CAD & PB1 domains 757 836 - -
Alju03g0299 891 Gene3D - 125 228 IPR015300 -
Alju03g0299 891 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Alju03g0299 891 Pfam AUX/IAA family 756 844 IPR033389 -
Alju03g0299 891 ProSiteProfiles PB1 domain profile. 759 843 IPR000270 GO:0005515
Alju03g0299 891 CDD B3_DNA 126 227 IPR003340 GO:0003677
Alju03g0299 891 SMART B3_2 127 229 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0299 Alju-ChrAlju03 10323278 10328906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0299 1 484 B3 DNA Binding Superfamily AT1G30330 84.663 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Alju03g0299 B3 1.4e-22 CL0405