Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g0293 | ATGTTGAGATGTGTGCGCATTGTTGAAGACGTTGATGCTGAGCTCAATGGATGTGCTTTATTCAGGGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGAAAAATAATAATCTGTGATCAGTGTGATAAAGAATTTCATGTGGGCTGCTTGAGGGATCATAAAATGTTATTTTTGAAGGAATTGCCAGAAGGGGATTTGTTTTGTTGCCATGATTGCTCAAGCATACATTCTACTTTTCAGAACCTCCTCGTTAGGCTGAGAAACATCCAGAACCTCTCTTGGATGTTATAA | 294 | 0.4014 | MLRCVRIVEDVDAELNGCALFRGSDFSRSGFGPRKIIICDQCDKEFHVGCLRDHKMLFLKELPEGDLFCCHDCSSIHSTFQNLLVRLRNIQNLSWML | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g0293 | 97 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 17 | 76 | IPR013083 | - | |
| Alju03g0293 | 97 | PANTHER | AUTOIMMUNE REGULATOR | 3 | 86 | - | - | |
| Alju03g0293 | 97 | SMART | PHD_3 | 17 | 74 | IPR001965 | - | |
| Alju03g0293 | 97 | SUPERFAMILY | FYVE/PHD zinc finger | 32 | 78 | IPR011011 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g0293 | Alju-ChrAlju03 | 10067341 | 10068088 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g0293 | 3 | 85 | PHD Transcription Factor Family | AT2G36720 | 60.241 | 1.00e-33 | 120 |