Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0274 ATGGCGATATCTCCAGGAGAGGGACCAAGCAGGAACAACAATTCTCCAATTCGAAAGCGACCAAGGATTACAATGCGCCACAGAAGTAGAGAGTCCGAGGCACGACATGTTGTAGAGGCACAAGGTAGGCGCACCAATGACGAAGGTCGTGAAAGCAACATCGGAGAAGGAAGGGAACGGCAGAATGAAGAGACTAGAGAAGATGCTGAAGAAGCAGAAGACGCTGACGCCGAAGAAGCAGTAGGCGTCCACGATGAAGAAGAAGAATCAGAAGAGGTCTACGAATTTGTTGGCGTTGAAGAGGAAGTCGCTTCTGGAGGAGACGGTGGTGGTGATAGGGATGGGTCAATTTCTGTGACTCTCACTGATCCTGATATTCTCAATTGCTGCATTTGCTGTGAGCCTTTGACTATTCCTGTATTTCAGTGTGAGAATGGACATATTGCATGCTCTACCTGTTGTGTCCGAATTGCCCATAAGTGTTATTCGTGCCGGGAGCCCATCGGCCACATCCGTTGCCGAGCCATTGAGAAGGTTATAGAATCTATTAAAATATCATGCCGCTATGCAAGACAAGGCTGCAAAGAGAAAATTACTCGCATCAACAAAAGTATCCATGAGAATGATTGCATCTACACCCCATGTTGGTGCCCAATTGATGGTTGCCAGTTCACAGCTCCAAGCAAGAAGTTGTCCCAGCACATCAACCATGAGCATCACGGAAGCTTTATAAACTTTCATTATGATAGCTTCATCTATCTCAAGTTGGGGCTCAACCAGAAAGTTGTTGTTCTTAAAGAGCAAACTGACTCTAATTTATTTATTATAACAAATGGTCGGGAGCATATGGGCAATATGATCAACGTCTTTCATGTTGGCCCCAAGTCATTGACTGAGATGTATCAGTATGATCTTTATGCAAGATCACAGGGATGCTGTCTGAAACTAGAATCTTTTGTCAATCACACCCTTGGCAACAATTTTCCTGCTACAACAAAGTATCTTCTAGTTCCAACTGGTTTTCTTGGTCCTTCTCCAGTTGTCAAGATAGAAATTCGTATATATAAAGTGTATGAATCCTACAGGAGTGGGTAA 1095 0.4411 MAISPGEGPSRNNNSPIRKRPRITMRHRSRESEARHVVEAQGRRTNDEGRESNIGEGRERQNEETREDAEEAEDADAEEAVGVHDEEEESEEVYEFVGVEEEVASGGDGGGDRDGSISVTLTDPDILNCCICCEPLTIPVFQCENGHIACSTCCVRIAHKCYSCREPIGHIRCRAIEKVIESIKISCRYARQGCKEKITRINKSIHENDCIYTPCWCPIDGCQFTAPSKKLSQHINHEHHGSFINFHYDSFIYLKLGLNQKVVVLKEQTDSNLFIITNGREHMGNMINVFHVGPKSLTEMYQYDLYARSQGCCLKLESFVNHTLGNNFPATTKYLLVPTGFLGPSPVVKIEIRIYKVYESYRSG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0274 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 235 IPR013083 -
Alju03g0274 364 MobiDBLite consensus disorder prediction 26 65 - -
Alju03g0274 364 CDD RING-HC_SIAHs 127 165 - -
Alju03g0274 364 MobiDBLite consensus disorder prediction 66 93 - -
Alju03g0274 364 ProSiteProfiles Zinc finger SIAH-type profile. 182 240 IPR013010 GO:0008270
Alju03g0274 364 MobiDBLite consensus disorder prediction 1 93 - -
Alju03g0274 364 SUPERFAMILY TRAF domain-like 182 343 - -
Alju03g0274 364 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 66 357 IPR044286 -
Alju03g0274 364 Coils Coil 55 78 - -
Alju03g0274 364 Pfam Seven in absentia protein family 171 311 IPR018121 GO:0005737|GO:0006511|GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0274 Alju-ChrAlju03 8974103 8976335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0274 125 239 C3H Transcription Factor Family AT2G41980 36.752 5.50e-21 90.5