Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0272 ATGGCGATATCTTCGGGAGAGGGACCAAGCAGGAACAACATCTCTCGAATTAAAAAGCGACCTAGGATTACAATTCGCTACGGAAGTAGAGAGTCCGAGGAACGACATGTCGTAGAGGCCCAAGGTGGGAGCACCAACGACGAAGATCGTGAACGCGACGCCGGAGAAGGAAGGGAACGACAGAATGAAGACATTGAAGAAGAAGCAGAGGACTTCGCCGCCGCCGAAGAAGAAGAATCAGAAGATGTCATCGAAATGGTTGACGTCGAAGAGTCATTATGTGGAGAGAAAGTCGCTTCTGGAGGAGACGGTGGTGGTGGTAGGGATGGGTCCATTCCTGTGACTCTCACCGATCCTGATATTCTTAATTGCTGCATTTGCTGTCAGCCTTTGACTATTCCTGTATTTCAGTGTGAGAATGGACATATTGCATGCTCTACCTGCTGTGTCCGACTTGCCCATAAGTGTTATTCGTGCCCGGCGCCCATTGGCAACATCCGTTGCCGAGCCATTGAGAAGGTGTTGGAATCTCTTAAACTATCATGCCGCTATGCAAGACATGGCTGTATAGAGAAAATTACTCACATCAACAAAAGTATCCATGAGAAAGATTGCATCTACACCCAATGTTGGTGCCCTATTGATGGTTGTCAGTTCACTGCTCCAAGCAAGAAGTTGTCATGGCACATCAACCATGAGCATCATGGAAGCTTTATAAACTTTTATTATGATAGCTTCCTCTATCTCACGTTGGGGCTCAACCACAAAGTCGTTGTTCTTAAAGAGGTAACTGACTCTAATATATTTATTATAAAAAACGACCTGGAGTATTTGGGGAATGTGATCAAAGTCTTTCACATTGGCCCTAAGTCATCGGCTGAGACATATCGGTATGAACTTTATGCGAGATCACAGGGATGCTGTCTGAAACTAGATTCTTTTGTCAATCATACTCTTGGCAACAATTTTCCTGCTACAACAAAGTTCCTCCTGGTTCCAATTGATTTTCTCGGCCCTTCTCCAGAAGTCAATATAGAAATTCGCATATACAAGTTGTATGAATCCAGCAGGTGCGAGTAA 1080 0.4481 MAISSGEGPSRNNISRIKKRPRITIRYGSRESEERHVVEAQGGSTNDEDRERDAGEGRERQNEDIEEEAEDFAAAEEEESEDVIEMVDVEESLCGEKVASGGDGGGGRDGSIPVTLTDPDILNCCICCQPLTIPVFQCENGHIACSTCCVRLAHKCYSCPAPIGNIRCRAIEKVLESLKLSCRYARHGCIEKITHINKSIHEKDCIYTQCWCPIDGCQFTAPSKKLSWHINHEHHGSFINFYYDSFLYLTLGLNHKVVVLKEVTDSNIFIIKNDLEYLGNVIKVFHIGPKSSAETYRYELYARSQGCCLKLDSFVNHTLGNNFPATTKFLLVPIDFLGPSPEVNIEIRIYKLYESSRCE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0272 359 Pfam Seven in absentia protein family 166 305 IPR018121 GO:0005737|GO:0006511|GO:0007275
Alju03g0272 359 ProSiteProfiles Zinc finger SIAH-type profile. 177 235 IPR013010 GO:0008270
Alju03g0272 359 MobiDBLite consensus disorder prediction 24 62 - -
Alju03g0272 359 MobiDBLite consensus disorder prediction 63 82 - -
Alju03g0272 359 CDD RING-HC_SIAHs 122 159 - -
Alju03g0272 359 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 63 352 IPR044286 -
Alju03g0272 359 SUPERFAMILY TRAF domain-like 177 347 - -
Alju03g0272 359 MobiDBLite consensus disorder prediction 1 82 - -
Alju03g0272 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 172 230 IPR013083 -
Alju03g0272 359 Coils Coil 58 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0272 Alju-ChrAlju03 8824892 8827757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0272 84 234 C3H Transcription Factor Family AT2G41980 33.333 4.03e-20 87.8