Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0232 ATGGCTCATTCAGTTGAACGATCCTCATCTTTGAGCTTTACTTCATCTTCCCGTTTATCAAATGGTTCAGTTAGCCATAATGTATGTGCTTCTCATTACCCTGATCCTGGACCTAACCTCGAAACAATCAGTTTGAGTAAGCTCAGCTCTAATTTAGAGCAGCTTTTGGATGATTCTGATTGTGATTACAGTGACGCTGACATAATTGTTGAAGGAACACCAGTTGTTGTTCATCGATGTATTCTTACCTCTAGAAGCAAGTTTTTTCATGAGTTATTCAAGAGGGAGAAAGGACCTCAAGAGAAGGAAGGCAAATTAAAGTATTTGATGAGTGATTTCTTGCCTTATGGCAAGGTTGGATATGAAGCCTTCCTCATCTTTTTGGGATATGTGTATACTGGGAAACTCAAGCCCTCTCCAATGGAGGTGTCAACATGTGTTGACAATGTATGTGCCCATGATGCTTGTCGGCCTGCAATTAATTTTGCTGTTGAGCTGATGTATGCATCTTCCATTTTTCAAATGCCTGAACTGGTATCACTTTTCCAGCGACGTCTTCTTAATTTTGTAGGGAAGGCTTTTGTGGAAGATGTAATACCAATCCTCACTGTTGCTTTCCATTGTCAATTGAGTCAACTTGTCACTGAATGCATTGAACGGATGGCACGATCAGACCTAGATTATGTCTCAATTGATAAGGAGATTCCCCCTGAACTCTCAGAAAAAATTAAACTACTTCGGTGCAGCGCCCAGCATGATGTTGAAGATAATGCTTCTTTGGTGGATCCATTGCATCAAAAGAGAATCACTAGAATACACAAGGCTTTGGACTCAGATGATGTTGAGCTTGTTAAACTTCTTTTATCCGAGTCTGATATGACTTTAGATGAAGCCAACGCTCTCCATTATGCTGCAGCGTACTGTGATCCTAAGGTTTTCTCTGAGGTACTTAATTTGGGTCTGACTAATGTCAACCTTCGGAATTCTCGAGGATATACTGTTCTTCATATTGCTGCCATGCGTAAGGAGCCTTCAATTATAGTTTCACTTCTTACAAAGGGGGCTCATGTGTCAGAATTGACTTTGGATGGTCAAAGTGCTGTTAGCATCAGCCGGAGGTTAACGAGGCCAAAGGATTACCATGCAAAAACAGAACAGGGGAAGGAAACAAACAAAGACCGAATGTGTATCGATCTTCTTGAAAGAGAAATGCTGAGAAATCCAATGTCTGGTGAGGCCTCTATGTCTTTCCAAATAATGGGTGATGATCTGCACAGGAAGCTGCAATACCTTGAGAACAGAGTGGCATTGGCAATATTGTTCTTCCCTGCGGAAGCCAAAGTAGCCATGGACATTGCGAAGGCTGAGACAAAAGGCTCAAGTGGGAATTTCAAGGAGGTTGATCTTAATGAGACTCCCATAATGCAAAACAAAAGACTTCTTTCCAAGGTGGAAGCCCTTATGAAAACAGTGGAGACAGGCCGGCGATACTTTCCTCATTGCTCGGAAGTGCTGGATAAGTTCATGGAGGAAGAGCTGCCTGATATGTGTTACCTTGAGAAGGGTTCTCAAGAAGAGCAGAGAATGAAGACAACACGTTTCATGGAGCTTAAAGACAATGTTCAAAAGGCCTTCAACAAGGACAAAGCTAAGTTTTGCCACTCTGGGATTTCTCCTTCATCTTCCTCATCTTCCCTCAACAACAATCATGTGCATAACGAGGCAAGAAAAGTGTGA 1737 0.4203 MAHSVERSSSLSFTSSSRLSNGSVSHNVCASHYPDPGPNLETISLSKLSSNLEQLLDDSDCDYSDADIIVEGTPVVVHRCILTSRSKFFHELFKREKGPQEKEGKLKYLMSDFLPYGKVGYEAFLIFLGYVYTGKLKPSPMEVSTCVDNVCAHDACRPAINFAVELMYASSIFQMPELVSLFQRRLLNFVGKAFVEDVIPILTVAFHCQLSQLVTECIERMARSDLDYVSIDKEIPPELSEKIKLLRCSAQHDVEDNASLVDPLHQKRITRIHKALDSDDVELVKLLLSESDMTLDEANALHYAAAYCDPKVFSEVLNLGLTNVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGAHVSELTLDGQSAVSISRRLTRPKDYHAKTEQGKETNKDRMCIDLLEREMLRNPMSGEASMSFQIMGDDLHRKLQYLENRVALAILFFPAEAKVAMDIAKAETKGSSGNFKEVDLNETPIMQNKRLLSKVEALMKTVETGRRYFPHCSEVLDKFMEEELPDMCYLEKGSQEEQRMKTTRFMELKDNVQKAFNKDKAKFCHSGISPSSSSSSLNNNHVHNEARKV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0232 578 FunFam regulatory protein NPR3-like 264 404 - -
Alju03g0232 578 PANTHER REGULATORY PROTEIN NPR3 10 573 IPR044292 GO:0009862|GO:2000022|GO:2000031
Alju03g0232 578 SMART ANK_2a 296 326 IPR002110 GO:0005515
Alju03g0232 578 SMART ANK_2a 330 359 IPR002110 GO:0005515
Alju03g0232 578 SMART ANK_2a 267 295 IPR002110 GO:0005515
Alju03g0232 578 FunFam Regulatory protein NPR3 38 222 - -
Alju03g0232 578 MobiDBLite consensus disorder prediction 556 578 - -
Alju03g0232 578 SUPERFAMILY Ankyrin repeat 260 372 IPR036770 -
Alju03g0232 578 ProSiteProfiles Ankyrin repeat region circular profile. 330 358 - -
Alju03g0232 578 MobiDBLite consensus disorder prediction 1 21 - -
Alju03g0232 578 ProSiteProfiles BTB domain profile. 64 140 IPR000210 GO:0005515
Alju03g0232 578 Pfam NPR1/NIM1 like defence protein C terminal 372 564 IPR021094 -
Alju03g0232 578 Pfam Ankyrin repeats (3 copies) 273 357 IPR002110 GO:0005515
Alju03g0232 578 Gene3D Potassium Channel Kv1.1; Chain A 39 223 IPR011333 -
Alju03g0232 578 Pfam BTB/POZ domain 62 180 IPR000210 GO:0005515
Alju03g0232 578 CDD BTB_POZ_NPR_plant 47 190 - -
Alju03g0232 578 MobiDBLite consensus disorder prediction 556 571 - -
Alju03g0232 578 SUPERFAMILY POZ domain 46 188 IPR011333 -
Alju03g0232 578 ProSiteProfiles Ankyrin repeat profile. 330 362 IPR002110 GO:0005515
Alju03g0232 578 Gene3D - 240 404 IPR036770 -
Alju03g0232 578 SMART BTB_4 64 190 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0232 Alju-ChrAlju03 7973217 7978050 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju03g0232 NPR1_like_C 1.6e-79 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g0232 03 7973217 7978050 Alju03g0232 03 7973217 7978050 ECH