Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0221 ATGGAATGGGCTTCCATCAACTTCAGTCTTCCGTTGACTTGGACAACGACTCCTAAAAATAAGGCAGTTCTGATCATGAAGTTAGCAAATGGTATAGTTCTTATCTGTCTTATATCATTCTCTTACTACTGCTTATTTTGTGCAGCTTCTGACGCCATAACCGTTGGCAAACCCATTAGCGATGGAGAACTTCTTATTTCTGAAGGAAAAAAGTTTGCTCTTGGGTTCTTCTTTCCTGGCAAATCTAGATCTCGCTATGTTGGAATCTGGTACTATAACTTGCCAAAGCAAACTGTTGTTTGGGTTGCAAACAGAGACAATCCCATCAATGACACCTCTGGAGTACTCTCCCTCAGCTCAGATGGGAATCTTATACTCCACCACAATAACAGCAACTTCCCCGTCTGGTCCACGAATGTTTCTGTCACTGTTTCAAGTAACAGAGTTATGGCGCAACTCTCTGACGTAGGTAATCTTGTTCTAATTCAAAACAACCTCAAAACTATGTTCTGGCAAAGCTTTGATCATCCCACCGATACCTTTCTTCCATATGCCAAACTGGGCTTCAACAAAAGAACTGGTCAAAACTGGTTCTTTCAGGCATGGAGGACAGATGATGATCCTGCAACAGGAAGCTTATCTACTAGGTTCAATTCTTCTGGCAAAGCTCAGTTGTTTCTGTACAAACAAAATGTTCCAGTGGGGCGAGTTGGATCCTTCAATGGAGAAATATTGGTGGGCCTGCCAGTTTTGAAACGGCCTATGTTGATTGCTTTCAATTTCTCTTTTACAGAAGATGATAATGAGGTTAGCGTCATGTATCATGCCTTGGATAACACCTCCATAGTCAAGATTGTAACTATTCCATCGGGAGCAATACAAGTACATAAATGGGATTACAATGAGAAAGATTGGAAGCAATATGGGTTTTTTCCTGAAGTGGACTGTGACCTGTATGGATGGTGCGGACCCAATAGTAATTGTCACTCTTACAATGATCCATACAAAAAGTGTAGTTGCCTACCGGGGTTTGAACCCAGAAGCTCCAACGATTGGTTTGAGAAGAATGATCAAGCAACAGGTTGTGTGAGGAAGAAAGGACCACCCTTGTGCAGAAATGGAGAAGGCTTCATTAAAGTAGAAAGTGTCAAGATTCCTGATACATCTATAACAAATGTTAGAAAGGGTTTGAGCATGGAGCAATGTGAACAAGAGTGCTTGAGAAACTGCTCTTGCACTGCATATGCTGCTGCAGATGTAAGAAATGGAGGAAGTGGATGCTTAGCATGGCATGGGACTCTGATGGACACAATAGTATTAAATGATGAAGGCCATGATTTATATGTTCGTGTTGATGCCATTGAACTAGCAAATTATAACAGGAAATCGAAAGGAACACTTTCTGTGTCTGGAATGGTGGGAATTCTGATGGCTGTCGTTGCGATTATTCTTCTTATTGCCATATGTGTTTATTGCTTTTGGATGAAGAAAAAGAGAGACAAAATGGCTGAGCAACAAATAAACATGGAATCTCCCTCAGAAGAAGGGTGTGGTGAAAATAGAACCCAAGTAAGCTTACCATTTTTCAACATTAAAACTATACAGGTTGCTACAAATAATTTTTCAAGTGAGAATGAGTTAGGGCATGGTGGATTTGGCTCCGTCTATAAGGGCTTATTAGCTAATGGACAAGAGATAGCAGTGAAAAGACTGTCTAAAGGTTCAGGACAAGGGACTGAAGAGTTCAAAAATGAAATTAAACTGATTGCTAAATTGCAGCACAGGAATCTTGTAAGGTTGCTTGGATATTGCATTCATAAAAAAGAAAGATTGTTAATCTATGAGTACCTTCCCAACAAAAGCTTGGACTTCTATCTCTTTGATATGAATCAAAGATCTTCTTTAGATTGGGATAAGCGTGTTCATATTATTTTTGGAATTGCTCGAGGTCTTCTCTATCTTCATCATGATTCAAGGTTAAAAGTAATCCATCGAGACCTTAAAGCCAGCAATGTTCTCTTGGATGCTACAATGAACTCCAAAATTTCAGATTTTGGTATGGCTAGAATATTTGGAGAGGACGAAATCCAAGTAAGAACAAGGAGGATTGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGGAAGGACAATATTCAACGAAGTCTGATGTCTTCAGCTTTGGTATTCTTTTACTAGAGATTATTAGTGGCAGGAGAAATACAGATCGTGAAAAGGAAGGATCACACTTGAATTTGATTGGACAAGTATGGGACTTGTGGGAAGAAGGAAAGGCCTTGGAAATAGTAGACTCAACACTTGGTGAATCATATCCTGTTGATGTTGTCCTAAGATACGTCAAAACAGGGCTCTTGTGTGTGCAAGAAATTGCCATCCAAAGGCCATCCATGTGTGAGGTTATATTCATGCTTGGCAATGATGTAAGCCTTCCCTCGCCTCAAAAACCTGCATTTCTGTTCAATTCTAATTTCTATTCAGAGACTTCAACCTCTAGGGAAGCTTCAGCCAATGTCCTCACTCATTCTACAATTTGTGGTCGATAA 2568 0.3995 MEWASINFSLPLTWTTTPKNKAVLIMKLANGIVLICLISFSYYCLFCAASDAITVGKPISDGELLISEGKKFALGFFFPGKSRSRYVGIWYYNLPKQTVVWVANRDNPINDTSGVLSLSSDGNLILHHNNSNFPVWSTNVSVTVSSNRVMAQLSDVGNLVLIQNNLKTMFWQSFDHPTDTFLPYAKLGFNKRTGQNWFFQAWRTDDDPATGSLSTRFNSSGKAQLFLYKQNVPVGRVGSFNGEILVGLPVLKRPMLIAFNFSFTEDDNEVSVMYHALDNTSIVKIVTIPSGAIQVHKWDYNEKDWKQYGFFPEVDCDLYGWCGPNSNCHSYNDPYKKCSCLPGFEPRSSNDWFEKNDQATGCVRKKGPPLCRNGEGFIKVESVKIPDTSITNVRKGLSMEQCEQECLRNCSCTAYAAADVRNGGSGCLAWHGTLMDTIVLNDEGHDLYVRVDAIELANYNRKSKGTLSVSGMVGILMAVVAIILLIAICVYCFWMKKKRDKMAEQQINMESPSEEGCGENRTQVSLPFFNIKTIQVATNNFSSENELGHGGFGSVYKGLLANGQEIAVKRLSKGSGQGTEEFKNEIKLIAKLQHRNLVRLLGYCIHKKERLLIYEYLPNKSLDFYLFDMNQRSSLDWDKRVHIIFGIARGLLYLHHDSRLKVIHRDLKASNVLLDATMNSKISDFGMARIFGEDEIQVRTRRIVGTYGYMSPEYAMEGQYSTKSDVFSFGILLLEIISGRRNTDREKEGSHLNLIGQVWDLWEEGKALEIVDSTLGESYPVDVVLRYVKTGLLCVQEIAIQRPSMCEVIFMLGNDVSLPSPQKPAFLFNSNFYSETSTSREASANVLTHSTICGR 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0221 855 SMART serkin_6 541 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0221 855 ProSiteProfiles Bulb-type lectin domain profile. 50 174 IPR001480 -
Alju03g0221 855 Pfam D-mannose binding lectin 98 203 IPR001480 -
Alju03g0221 855 Pfam Protein tyrosine and serine/threonine kinase 544 743 IPR001245 GO:0004672|GO:0006468
Alju03g0221 855 ProSitePatterns Protein kinases ATP-binding region signature. 547 569 IPR017441 GO:0005524
Alju03g0221 855 ProSiteProfiles PAN/Apple domain profile. 371 452 IPR003609 -
Alju03g0221 855 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 617 820 - -
Alju03g0221 855 CDD B_lectin 58 177 IPR001480 -
Alju03g0221 855 CDD PAN_AP_plant 372 451 - -
Alju03g0221 855 Gene3D Phosphorylase Kinase; domain 1 501 616 - -
Alju03g0221 855 PIRSF SRK 21 855 IPR024171 GO:0004674
Alju03g0221 855 Gene3D Transferase(Phosphotransferase) domain 1 617 818 - -
Alju03g0221 855 Gene3D - 45 175 IPR036426 -
Alju03g0221 855 Pfam PAN-like domain 371 437 IPR003609 -
Alju03g0221 855 SMART blect_4 56 177 IPR001480 -
Alju03g0221 855 Gene3D Laminin 318 371 - -
Alju03g0221 855 Pfam S-locus glycoprotein domain 236 347 IPR000858 GO:0048544
Alju03g0221 855 ProSiteProfiles Protein kinase domain profile. 541 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0221 855 CDD STKc_IRAK 547 812 - -
Alju03g0221 855 SMART ntp_6 372 451 IPR003609 -
Alju03g0221 855 SUPERFAMILY Protein kinase-like (PK-like) 525 837 IPR011009 -
Alju03g0221 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Alju03g0221 855 Gene3D Hepatocyte Growth Factor 372 448 - -
Alju03g0221 855 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 36 804 - -
Alju03g0221 855 SUPERFAMILY alpha-D-mannose-specific plant lectins 99 208 IPR036426 -
Alju03g0221 855 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 506 616 - -
Alju03g0221 855 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 45 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0221 Alju-ChrAlju03 7600013 7605063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0221 475 830 Receptor kinase-like Gene Family AT4G05200 50.276 4.87e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju03g0221 PK_Tyr_Ser-Thr 3.4e-48 CL0016