Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0113 ATGTTTCAGAAAGCGAATTTGAAGAAATGTTGGATGAATCATATTCAGAAGAAGAAGATCAAGAAGAAGGGAAATGACTATGAAGAAACAGAAGACGATGACGGCAATAATCACTGGAAGTCAATAGAAAGTTTAGAAAAGGTTGAGATTGAAGAGTCTTTAATGTGTTCAATATGTTTGGAGGAGATTACTCGCTTAAATAAGGAAGAAAAAGAAGGAGCAGTTCGAATTCCTAAGCCTTGTGGTCATGTGTATCACCATAACTGCATCCTCAAATGGCTCATCAACCACCATACTTGTCCTCTGTGTCGCTTCAAGATTATAGGCTAA 330 0.3727 MFQKANLKKCWMNHIQKKKIKKKGNDYEETEDDDGNNHWKSIESLEKVEIEESLMCSICLEEITRLNKEEKEGAVRIPKPCGHVYHHNCILKWLINHHTCPLCRFKIIG 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0113 109 SUPERFAMILY RING/U-box 44 107 - -
Alju03g0113 109 Pfam Ring finger domain 55 104 IPR001841 -
Alju03g0113 109 ProSiteProfiles Zinc finger RING-type profile. 56 104 IPR001841 -
Alju03g0113 109 SMART ring_2 56 103 IPR001841 -
Alju03g0113 109 MobiDBLite consensus disorder prediction 18 38 - -
Alju03g0113 109 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 109 IPR013083 -
Alju03g0113 109 MobiDBLite consensus disorder prediction 21 38 - -
Alju03g0113 109 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 40 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0113 Alju-ChrAlju03 2618271 2618600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0113 42 107 C3H Transcription Factor Family AT3G60080 36.486 2.40e-11 57.0