Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju03g0112 | ATGTCTAACCAAACTACTGGACCATCGGTATTTGAAATTGATCAACATACAAATTTCGGACGTGAAATAATTCGGGCTGTGCTTCTTGATAGTCAAGGCAACCATGTTTCAGAAAACGAATTTGAAGAAATGTTCGAAGAATCATATTCTGAAGAAGACGAAGAGCAGGAGGATGGCGACAATAATGACGATGAAGAAATAGAAGGCGACGACCGCAATAATCACCGGACGTCAATAGAAAATTTAGAAAAGGTTGATATTGAAGAGTCTTTATTGTGTTCAGTATGTTTGGAGGAGATTACTCCCTCAAATAAAGAAGAAAAAGAAGGAGCCGTTCGAATTCCTAAGCCTTGTGGTCATGTGTATCACCATAACTGCATCATCAAATGGCTCGTCAACCACCATACTTGTCCTCTGTGTCGCTTCAAGATTACAGGCTAA | 441 | 0.3968 | MSNQTTGPSVFEIDQHTNFGREIIRAVLLDSQGNHVSENEFEEMFEESYSEEDEEQEDGDNNDDEEIEGDDRNNHRTSIENLEKVDIEESLLCSVCLEEITPSNKEEKEGAVRIPKPCGHVYHHNCIIKWLVNHHTCPLCRFKITG | 146 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju03g0112 | 146 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 77 | 146 | IPR013083 | - | |
Alju03g0112 | 146 | SMART | ring_2 | 93 | 140 | IPR001841 | - | |
Alju03g0112 | 146 | SUPERFAMILY | RING/U-box | 81 | 144 | - | - | |
Alju03g0112 | 146 | MobiDBLite | consensus disorder prediction | 35 | 80 | - | - | |
Alju03g0112 | 146 | ProSiteProfiles | Zinc finger RING-type profile. | 93 | 141 | IPR001841 | - | |
Alju03g0112 | 146 | MobiDBLite | consensus disorder prediction | 43 | 67 | - | - | |
Alju03g0112 | 146 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 45 | 143 | - | - | |
Alju03g0112 | 146 | Pfam | Ring finger domain | 93 | 141 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju03g0112 | Alju-ChrAlju03 | 2611144 | 2611584 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju03g0112 | 86 | 144 | C3H Transcription Factor Family | AT3G60080 | 44.068 | 1.93e-11 | 58.5 |