Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0112 ATGTCTAACCAAACTACTGGACCATCGGTATTTGAAATTGATCAACATACAAATTTCGGACGTGAAATAATTCGGGCTGTGCTTCTTGATAGTCAAGGCAACCATGTTTCAGAAAACGAATTTGAAGAAATGTTCGAAGAATCATATTCTGAAGAAGACGAAGAGCAGGAGGATGGCGACAATAATGACGATGAAGAAATAGAAGGCGACGACCGCAATAATCACCGGACGTCAATAGAAAATTTAGAAAAGGTTGATATTGAAGAGTCTTTATTGTGTTCAGTATGTTTGGAGGAGATTACTCCCTCAAATAAAGAAGAAAAAGAAGGAGCCGTTCGAATTCCTAAGCCTTGTGGTCATGTGTATCACCATAACTGCATCATCAAATGGCTCGTCAACCACCATACTTGTCCTCTGTGTCGCTTCAAGATTACAGGCTAA 441 0.3968 MSNQTTGPSVFEIDQHTNFGREIIRAVLLDSQGNHVSENEFEEMFEESYSEEDEEQEDGDNNDDEEIEGDDRNNHRTSIENLEKVDIEESLLCSVCLEEITPSNKEEKEGAVRIPKPCGHVYHHNCIIKWLVNHHTCPLCRFKITG 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0112 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 146 IPR013083 -
Alju03g0112 146 SMART ring_2 93 140 IPR001841 -
Alju03g0112 146 SUPERFAMILY RING/U-box 81 144 - -
Alju03g0112 146 MobiDBLite consensus disorder prediction 35 80 - -
Alju03g0112 146 ProSiteProfiles Zinc finger RING-type profile. 93 141 IPR001841 -
Alju03g0112 146 MobiDBLite consensus disorder prediction 43 67 - -
Alju03g0112 146 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 45 143 - -
Alju03g0112 146 Pfam Ring finger domain 93 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0112 Alju-ChrAlju03 2611144 2611584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0112 86 144 C3H Transcription Factor Family AT3G60080 44.068 1.93e-11 58.5