Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0093 ATGGTCTTCGCAGCAGCCTTTATGCATGAACATGACCCTTTTTCTTTCTCCAAGAAGAGCCTTGTAGTATCAGATTTTGGATATCAAGGTCTACATCCACATGCATATGCAGGACGTTTCAGTGATGCACCATTGCCTTCGCATCTGGATGTAGAAAGGGATACTGGTGAAATTCCCTCTTGTTCCAGTCTTGATGATAGAATTGATTCAGATTCTGGATTGGATATGAGCTGCCAGACAAATATTAAAAGCGTTGATATTCCTGTATGCTTTACATCAGGAAATATTTCATTCCAGGATCAAAGCCATCCTGGCTATATGCAGCCTGCTTTTGTTAGTGGATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATCCAGGCGCAACTATATGAAGGATTAACCACTGGTTTCTTGCCAGCTGATCTTCCTGTGTATCCTGTGATTAATGGCGCATTAATGAACCCTGTACCACTGAATTACTTCAAGCAGTTTCCTGATCATGTTTCTACTGGGTTCGTATATCTGAGCATGAGTAGCTCAGTCATATCCATGCCTACAGGTTGCTCCACATCATCTGGGAAGGATATGACATCATATAGACAAGGATCCTTTGAGCATGCTCCTCCTGTAGCTGTCAACCTTGATTCACAGACAGTTTTTCAGTCACATGTCAACTACACCAGTAAGGAATTCTTAGCATCGAACTCAAAGTTACATGAAGAATGCTGTTGGCTTTATGAGGATGAAAAAGGAATGAAGCATGGACCACATTCCATTTTGGAATTAATTTCCTGGCATCATTATGGACATCTCCGAGATTTGTCTGTGATTCATCATACTGAAAATAAGTGTAGCCCCTTTGTCCTTTTGTCTGCTGTAAATGCATGGAAAACAGGAACGTTTGAAAACATCTGTAGATCAGATTCCAAAAGTGACAGGGCTTGTAGTGATACCAGAAGCTTCATCTATGAAATCTCTGAAGACATTTCTTCTCAGCTGCATTCAGGAGTCATGAAAACTGCCCGTAGGGTGGTGTTGGATGAGATTATCAGTAACACCATTGCAGAATTTGTTACTGAAAAGAAATCTCGGAGGCATAAGCATGACTCAGTTGATCAGCCTTCTGAGACTAGCTTGTTAGGCTGCAGAATGACTGAGACTGCTGTGGAGATGAGAAAAGGTACTGTTCTCACAAGTGAGCCATCATCTTCCCAAATACTTGATGATCAGTCGTCTTGCGAAGTTTCCAGAATGTCTCCAACAAGCACTAAATCAGTTGGAAGCATTGAAAACTTTTGGTGGTCATATGTTGTTGTTCGAAAAGTACTTAATGATTATTGCATGCAAGTCATGTGGAATGCTGTGGTTTATGACTCTATGGCAGAGTACATACATAACTGGAGAAAGAGAAAACTATGGTCTATTTGTCCTAAGCCTCAATTATCTATTAGTGGATGTAAAGATTATGGTGGAATTATCACATCAGCAGAAGCCTTGCTTCCCAGGCCAGGTTCCTCTGAACATGATGCTGTTCGGCATCATCATTGTGGAGTGGTGGCAATGGAGGGGGACTATCTTAGTCAATCATCTTCTATGTCTTCTGCTGTCTTGAAAGATGGAAACATTTCAGAAAATGGAAGAGCGTCATGTTCTGATTGTGATCATAGAGATTTGAAATGCATTATTGAAAATGTGGAGAATGAGCTTCACTTGATGTCACAGGCATCTTTAACTGAATACATTAAAAGTTTAGTTGACAAGGAAGTGAAAAGATTATTTAATTGTCCCCAAGAAGACACTTGGAACAAGGATGCTGTCAGTTGTGACGTTTTTTCAGAGATATCTTATGACAAAACATCTGAAGAGGGGATTTTATCTGACAATAAGGTTGCTATGATAGAAGGCGATGGTCTTCAAGATTCTATATCTGGAAGCCATATATCTACTTTATTCTCAAGAGTATTTCAGGAGTTGCATGCCAATGTAGTTGATGTGGTTAATGAAAAGGAGATTGGTGATGTCTTGCCTCCTGGATGTGAAAAGAATTCAAAAACTATTCTCCCACAATACAATTATAAGTATCGGCCTTCAAGATTAGTTGAAAGTGTTCCTAAGATAACAAAATATGTCACGACAGCCCTATGCCGACAGAAGTTGCATTCTGAGGTTCTTGAAGAGTGGAAATCTTCATTTCTTGATGCTGCATTCAATCAACTTTTTGCATCATTCTGCGCTACAAAGAAAGTCAGCCAGCCTGATGGTTACATGGTAGGGAAAGTACAGAATTCATCTGAGGAACATTTGAATGATCCAACTCTGGGAAGAATGAAGAAAAGACCCAAAATTTCTTCATCCAAAGATTCTCAGATGGTTGGGAAATACACGTATAATCGCAAGAAGCTGCCACAGAAAGAGTCAGGTTCTTCTCAAAACATAGCTGCGCCTGTCAAAAAACAAGTGTATAAGCAGAAGAAACATGTGGATAAGCAGAAGAAACGTGCTTCTGGGGATTTGGATGAGTCTGCCAAAGGTGCAATATCTCCTGATAAAAATGCACAGACTAAGCTGATAAAAGGAAAGAAGAATAAACAGGCTAATGTAAAGTCTCTTGCTGTCGGTCCTAACATAAACTTGCAGAGTAAAAAGTCATCTGTAAATAATGCAACTAGTAAAAAATTATTGAAGCATTCACAGGCAGGTCAAGATGATGTCAAGGATGATGAGAAAAGTAATGAAGAGAAGATTTCGACTGTTGTAGAAAATAGTGTTGGCAAGGAAAAGATAGTTGATAGCAATGGTTGTGATGGTGCCATTAATGGAAAATCCACTCGCTACTGCTCCAGGGAAACTCTGATCGCAACAAATAAAGTATCAAAACCAAAAAGGAAGCATCTAGCGGATGAAGTGCCATCATTACGTCCCTCAAAGGCTTTGAAAATTGCTTATAATGGTTCAAAGGTTGGAGTTGGTGGGCACAACATGTTAAAGACGAAGTCTGCTAAATCCAAGCCATTGAATTTATGTCCTAGATCTCTTGGATGTTCCAGGACTTCTATTGATGGGTGGGAATGGCATGAATGGTCTGTAAACGCTAGTTCTTCTGATAGAGCATTTGTTAGGGGAACGCTGTGTGGCCAAAAGAACTATATACCATCTGATAGTAATCCAACTCATTGGTCAAATTGTAAGGGTCTTTCTGCACGGACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCAAGGAAAAAACGTTTACGTTTTCAAAGAAGTAAAATACATGACTGGGGTATTGTTGCCTTGGAGTCAATAGAGGCGGAGGACTTCGTGGTTGAATATATTGGAGAACTAATCCGTCCTCGGATATCTGATATCCGTGAACGTCAGTATGAAAAGATGGGAATTGGCAGCAGCTACTTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACGAAAAGAGGTGGGATTGCAAGATTTATAAATCACTCTTGTGAGCCTAATTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCTAAGCGTCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAATTTCCCTTGGAGGAGAATAAGATTCCCTGCAACTGTGGCTCCAAAAAGTTTCGACATCCTTTACATAGTGATTTGATCTTTAATTTGGTTTACCTTGCATATTTTGGAATTGGCAAAGGCTTTGGTCATAGGATGGTATTATGCTTTCAGAAAAAGTGGCGTAGTTCTCTCCAAGATTCATACATTCTGTTTCAACATCCATTTCACCAAAGATTGCATTGGATGATTTGTGAGAGTTCTTGTACTTTGCAATCATACCTTGATATTGGTCAGCATCATTGA 3936 0.3968 MVFAAAFMHEHDPFSFSKKSLVVSDFGYQGLHPHAYAGRFSDAPLPSHLDVERDTGEIPSCSSLDDRIDSDSGLDMSCQTNIKSVDIPVCFTSGNISFQDQSHPGYMQPAFVSGWMYVNENGQMCGPYIQAQLYEGLTTGFLPADLPVYPVINGALMNPVPLNYFKQFPDHVSTGFVYLSMSSSVISMPTGCSTSSGKDMTSYRQGSFEHAPPVAVNLDSQTVFQSHVNYTSKEFLASNSKLHEECCWLYEDEKGMKHGPHSILELISWHHYGHLRDLSVIHHTENKCSPFVLLSAVNAWKTGTFENICRSDSKSDRACSDTRSFIYEISEDISSQLHSGVMKTARRVVLDEIISNTIAEFVTEKKSRRHKHDSVDQPSETSLLGCRMTETAVEMRKGTVLTSEPSSSQILDDQSSCEVSRMSPTSTKSVGSIENFWWSYVVVRKVLNDYCMQVMWNAVVYDSMAEYIHNWRKRKLWSICPKPQLSISGCKDYGGIITSAEALLPRPGSSEHDAVRHHHCGVVAMEGDYLSQSSSMSSAVLKDGNISENGRASCSDCDHRDLKCIIENVENELHLMSQASLTEYIKSLVDKEVKRLFNCPQEDTWNKDAVSCDVFSEISYDKTSEEGILSDNKVAMIEGDGLQDSISGSHISTLFSRVFQELHANVVDVVNEKEIGDVLPPGCEKNSKTILPQYNYKYRPSRLVESVPKITKYVTTALCRQKLHSEVLEEWKSSFLDAAFNQLFASFCATKKVSQPDGYMVGKVQNSSEEHLNDPTLGRMKKRPKISSSKDSQMVGKYTYNRKKLPQKESGSSQNIAAPVKKQVYKQKKHVDKQKKRASGDLDESAKGAISPDKNAQTKLIKGKKNKQANVKSLAVGPNINLQSKKSSVNNATSKKLLKHSQAGQDDVKDDEKSNEEKISTVVENSVGKEKIVDSNGCDGAINGKSTRYCSRETLIATNKVSKPKRKHLADEVPSLRPSKALKIAYNGSKVGVGGHNMLKTKSAKSKPLNLCPRSLGCSRTSIDGWEWHEWSVNASSSDRAFVRGTLCGQKNYIPSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKRLRFQRSKIHDWGIVALESIEAEDFVVEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKKFRHPLHSDLIFNLVYLAYFGIGKGFGHRMVLCFQKKWRSSLQDSYILFQHPFHQRLHWMICESSCTLQSYLDIGQHH 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0093 1311 Gene3D SET domain 1032 1243 IPR046341 -
Alju03g0093 1311 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 769 1234 IPR044570 GO:0042800|GO:0051568
Alju03g0093 1311 ProSiteProfiles SET domain profile. 1101 1218 IPR001214 GO:0005515
Alju03g0093 1311 MobiDBLite consensus disorder prediction 762 870 - -
Alju03g0093 1311 ProSiteProfiles GYF domain profile. 245 295 IPR003169 GO:0005515
Alju03g0093 1311 CDD SET_SETD1 1089 1236 IPR037841 GO:0042800|GO:0048188
Alju03g0093 1311 MobiDBLite consensus disorder prediction 774 788 - -
Alju03g0093 1311 Pfam SET domain 1113 1217 IPR001214 GO:0005515
Alju03g0093 1311 MobiDBLite consensus disorder prediction 900 919 - -
Alju03g0093 1311 MobiDBLite consensus disorder prediction 805 820 - -
Alju03g0093 1311 SUPERFAMILY SET domain 1096 1234 IPR046341 -
Alju03g0093 1311 MobiDBLite consensus disorder prediction 897 922 - -
Alju03g0093 1311 SUPERFAMILY GYF domain 243 297 IPR035445 -
Alju03g0093 1311 SMART set_7 1101 1224 IPR001214 GO:0005515
Alju03g0093 1311 Gene3D - 232 322 IPR035445 -
Alju03g0093 1311 Gene3D - 102 176 IPR035445 -
Alju03g0093 1311 MobiDBLite consensus disorder prediction 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0093 Alju-ChrAlju03 2273149 2288600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0093 1100 1236 C2H2 Transcription Factor Family AT2G23740 36.478 2.14e-17 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju03g0093 SET 1.8e-21 No_clan