Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju03g0091 | ATGCTTACTTTCTCCTACGTGGAGCGTAGTACAAACCCAGAGCCCCGGAAGTACAATGACTCATCCGGCAATTTGAAACTGTTGAAGGGCAATATCGTTCGGTACACCACCTTTGCAATGTCGCTTAGTGTCAGAGACCTCCAGTTAACTCCTCGTGCCGGTGGCCGTGAAACCTCTTTCGCGGTTGATTCCGGCGACCTCGAGGATGTCCGGCTCTTGGACTCGTATGACAAAAGGGATTGTTCATTTGGATCTGAAGACGGAATCAAACGGATTCAGGTCAGAGTCTCTGGCATGACCTGTGCTGCCTGCTCCAATTCCGTTGAAGCAGCTCTCAAGGCCATTGATGGCGTGCTCAGTGCCTCCGTTGCTCTGCTTCAGAATAAGGCTGATGTCGTTTTCAACTCAAGTCTGGTCAAGGACGAAGACATTAAAAATGCAATTGAAGATGCAGGATTTGAAGCAGACATATTACCTGAGACCAGTACAGTTGGACCAAAACTGCAACAAACCCTGGTTGGACAGTTCACAATTGGTGGTATGACATGTGCAGCCTGTGTAAATTCTGTTGAGGGTATTTTGAGGAATCTTGCTGGGGTCAAAAGGGCTGTTGTAGCTTTGGCAACTTCCTTGGGGGAAGTTGAATATGATCCAACTATAATTAGTAAAGATGATATAATCAATTCAATTGAAGATGCTGGTTTTGAAGCTTCATTTGTACAGAGTAGTGAGCAAGATAAAATAATTTTAGGGATTGTTGGTTTGTACAGCCTTATTGATGCACAAATTTTAGAAGCCTTGCTCAGCAGTATGAAAGGAGTAAAACAGTTTCATTTTGATCATATATCATGTGAACTGGAAGTTCTTTTTGATCCTGAAGTTCTCAATTCTAGATCCTTAGTTGATGGGATTGAAGGAGGAAGCAATGGGAAGTTTAAACTACATGTTAGGAGCCCATATGCAAGAATGGTCTCTAAGGATGTTGAAGAGATCACAACTATGTTTCGACTTTTTACCTCAAGCCTGTTTCTAAGTATTCCCCTTTTTCTAATTGGTGTAGTTTGTCCTCATATACCAATGATATACTCCTTACTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGCTTAAGTGGGCATTAACTAGTATAATTCAATTTGGGATTGGAAAGCGCTTCTACATTGCAGCTGGCAGAGCTCTTAAGAATGGTTCAACTAACATGGATGTGTTGGTTGCTTTGGGAACTACAGCTTCTTATGTCTATTCTGTTTGTGCTCTTCTTTATGGTGCCCTTACTGGATTTTGGTCTTCGACATATTTTGAAACAAGTGCGATGCTCATAACATTTGTATTGTTGGGGAAGTATTTGGAATGCCTTGCAAAGGGGAAGACATCAGATGCCATCAAGAAGTTAGTAGAACTGGCTCCTGCAACAGCCTTGTTGGTAGTCAAAGATAAAGGTGGGAAACCTATTGAAGAGAGGCAAATAGATTCATTGCTCATTCAGCCTGGTGACACATTAAAGGTTCTTCCTGGTACTAAGATTCCTGCTGATGGTACCGTTACATGGGGCTCAAGTTATGTAAATGAGAGTATGGTAACTGGTGAAGCTGTGCCTGTTTCAAAGGACGTTAATGCTTCTGTTATTGGAGGTACTATAAATTTACATGGTGTCCTTCACATTCAAGCCATCAAAGTAGGAGCTGATACAGTTTTGAGTCAGATAATTAGTTTGGTAGAGACAGCCCAGATGTCCAAAGCCCCTATTCAGAAATTTGCTGATTATGTAGCAAGCATTTTTGTCCCTACAGTTGTTTCTTTGGCATTATTGACATTATTGGGTTGGTATGTTGCTGGAGCTCTAAGAGCTTACCCTGACGAATGGCTGCCAAAAAACGGAAATCACTTTGTTTTTGCCCTTATGTTTGCAATATCTGTGGTGGTGATTGCATGTCCTTGTGCACTTGGCTTGGCAACACCAACTGCTGTCATGGTAGCAACAGGGGTTGGGGCTAAGAATGGAGTGTTAATTAAAGGAGGGGATGCCTTGGAAAAGGCTCAGATGGTGAAGCACCTAATATTTGATAAAACAGGTACTTTAACTCAGGGAAAAGCCACTGTTACGACTGCCAAGGTATTCACAGGAATGGAACGGGGAGAGTTTCTTACTCTGGTGGCTTCTGCAGAGGCTAGCAGTGAACATCCACTGGGGAAAGCAATAGTAGAGTATGCACGCCATTTTCATTTCTTTGATGAGTCATCTGCAGCCACTGTTACCAAAGATGCTGCCAAGGAGATAAAAGCTGGATGGCTTTATGATGTCTCAGACTTCTCTGCTCTTCCAGGAAGGGGTGTCCAGTGCCTTTTACACGGGAAGCGTATTCTGGTTGGTAACAGGAAGCTAATGGAGGAAAGTGGCATAGATATCCCAACCCAAGTGGAAAATTTTGTGGTGGAGCTGGAAGAAAGTGCAAAGACAGGAGTACTTGTTGCATATGGTGATGAATTAATTGGCGTTTTAGGGGTTGCAGACCCACTAAAAAGAGAAGCTTCTGTGGTTATAGAAGGCCTCCGGAAAATGGGTGTCAGGCCGGTTATGGTTACAGGAGATAACTTGAGAACTGCTCGGGCTGTTGCCAAGGAGGTTGGAATAGAAGATGTGAGAGCAGAGGTGATGCCAGCAGGGAAGGCTGAGGTTGTTCGTTCATTCCAAAAAGATGGAAGCATAGTGGCAATGGTGGGTGACGGGATCAACGACTCTCCAGCATTAGCTGCTGCAGATGTCGGCATGGCGATCGGAGCTGGCACCGACATCGCAATAGAAGCTGCAGACTATGTACTGATGAGAAACAATCTAGAAGATGTGATCACGGCCATTGATCTCTCGAGGAAGACCTTTTTTCGGATTCGATTGAACTATGTATTTGCAATGGCTTATAATGTTGTTGCTATACCAGTAGCTGCTGGGGTTCTCTACCCTTCATTAGGGATCAAGCTGCCTCCTTGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTAAGTGTTGTTTGTTCTTCTTTGCTTCTTAGAAGATATAGAAGAGCCAGACTTACTACAATACTTGAAATAGTTGTAGAATAA | 3126 | 0.4357 | MLTFSYVERSTNPEPRKYNDSSGNLKLLKGNIVRYTTFAMSLSVRDLQLTPRAGGRETSFAVDSGDLEDVRLLDSYDKRDCSFGSEDGIKRIQVRVSGMTCAACSNSVEAALKAIDGVLSASVALLQNKADVVFNSSLVKDEDIKNAIEDAGFEADILPETSTVGPKLQQTLVGQFTIGGMTCAACVNSVEGILRNLAGVKRAVVALATSLGEVEYDPTIISKDDIINSIEDAGFEASFVQSSEQDKIILGIVGLYSLIDAQILEALLSSMKGVKQFHFDHISCELEVLFDPEVLNSRSLVDGIEGGSNGKFKLHVRSPYARMVSKDVEEITTMFRLFTSSLFLSIPLFLIGVVCPHIPMIYSLLLWRCGPFLMDDWLKWALTSIIQFGIGKRFYIAAGRALKNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSSTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKPIEERQIDSLLIQPGDTLKVLPGTKIPADGTVTWGSSYVNESMVTGEAVPVSKDVNASVIGGTINLHGVLHIQAIKVGADTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVSLALLTLLGWYVAGALRAYPDEWLPKNGNHFVFALMFAISVVVIACPCALGLATPTAVMVATGVGAKNGVLIKGGDALEKAQMVKHLIFDKTGTLTQGKATVTTAKVFTGMERGEFLTLVASAEASSEHPLGKAIVEYARHFHFFDESSAATVTKDAAKEIKAGWLYDVSDFSALPGRGVQCLLHGKRILVGNRKLMEESGIDIPTQVENFVVELEESAKTGVLVAYGDELIGVLGVADPLKREASVVIEGLRKMGVRPVMVTGDNLRTARAVAKEVGIEDVRAEVMPAGKAEVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFFRIRLNYVFAMAYNVVAIPVAAGVLYPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRRARLTTILEIVVE | 1041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju03g0091 | 1041 | Gene3D | - | 173 | 239 | - | - | |
| Alju03g0091 | 1041 | ProSiteProfiles | Heavy-metal-associated domain profile. | 90 | 156 | IPR006121 | GO:0046872 | |
| Alju03g0091 | 1041 | Pfam | haloacid dehalogenase-like hydrolase | 691 | 929 | - | - | |
| Alju03g0091 | 1041 | ProSitePatterns | Heavy-metal-associated domain. | 178 | 207 | IPR017969 | GO:0046872 | |
| Alju03g0091 | 1041 | Pfam | Heavy-metal-associated domain | 94 | 154 | IPR006121 | GO:0046872 | |
| Alju03g0091 | 1041 | Pfam | Heavy-metal-associated domain | 176 | 236 | IPR006121 | GO:0046872 | |
| Alju03g0091 | 1041 | FunFam | Copper-exporting P-type ATPase | 795 | 846 | - | - | |
| Alju03g0091 | 1041 | SFLD | C1.7: P-type atpase like | 677 | 967 | - | - | |
| Alju03g0091 | 1041 | CDD | P-type_ATPase_Cu-like | 336 | 1011 | - | - | |
| Alju03g0091 | 1041 | SUPERFAMILY | HMA, heavy metal-associated domain | 172 | 243 | IPR036163 | GO:0046872 | |
| Alju03g0091 | 1041 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 697 | 703 | IPR018303 | - | |
| Alju03g0091 | 1041 | PRINTS | Copper-transporting ATPase 1 signature | 117 | 140 | - | - | |
| Alju03g0091 | 1041 | PRINTS | Copper-transporting ATPase 1 signature | 146 | 166 | - | - | |
| Alju03g0091 | 1041 | PRINTS | Copper-transporting ATPase 1 signature | 91 | 116 | - | - | |
| Alju03g0091 | 1041 | ProSitePatterns | Heavy-metal-associated domain. | 96 | 126 | IPR017969 | GO:0046872 | |
| Alju03g0091 | 1041 | Gene3D | - | 463 | 585 | - | - | |
| Alju03g0091 | 1041 | SUPERFAMILY | HAD-like | 694 | 1021 | IPR036412 | - | |
| Alju03g0091 | 1041 | CDD | HMA | 175 | 238 | IPR006121 | GO:0046872 | |
| Alju03g0091 | 1041 | FunFam | Copper-exporting P-type ATPase A | 170 | 240 | - | - | |
| Alju03g0091 | 1041 | CDD | HMA | 93 | 155 | IPR006121 | GO:0046872 | |
| Alju03g0091 | 1041 | Pfam | E1-E2 ATPase | 478 | 675 | - | - | |
| Alju03g0091 | 1041 | SFLD | p-type atpase | 677 | 967 | IPR044492 | - | |
| Alju03g0091 | 1041 | Gene3D | - | 702 | 794 | IPR023299 | GO:0000166 | |
| Alju03g0091 | 1041 | Gene3D | - | 795 | 846 | IPR023299 | GO:0000166 | |
| Alju03g0091 | 1041 | SUPERFAMILY | Calcium ATPase, transduction domain A | 496 | 581 | IPR008250 | - | |
| Alju03g0091 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 862 | 872 | - | - | |
| Alju03g0091 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 840 | 851 | - | - | |
| Alju03g0091 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 938 | 950 | - | - | |
| Alju03g0091 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 531 | 545 | - | - | |
| Alju03g0091 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 695 | 709 | - | - | |
| Alju03g0091 | 1041 | PRINTS | P-type cation-transporting ATPase superfamily signature | 915 | 934 | - | - | |
| Alju03g0091 | 1041 | ProSiteProfiles | Heavy-metal-associated domain profile. | 172 | 238 | IPR006121 | GO:0046872 | |
| Alju03g0091 | 1041 | NCBIfam | HAD-IC family P-type ATPase | 448 | 747 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Alju03g0091 | 1041 | NCBIfam | HAD-IC family P-type ATPase | 796 | 996 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Alju03g0091 | 1041 | NCBIfam | copper ion binding protein | 175 | 237 | IPR006122 | GO:0005507 | |
| Alju03g0091 | 1041 | NCBIfam | copper ion binding protein | 92 | 155 | IPR006122 | GO:0005507 | |
| Alju03g0091 | 1041 | FunFam | Copper-transporting ATPase RAN1 | 702 | 794 | - | - | |
| Alju03g0091 | 1041 | Gene3D | - | 662 | 972 | IPR023214 | - | |
| Alju03g0091 | 1041 | SUPERFAMILY | HMA, heavy metal-associated domain | 86 | 159 | IPR036163 | GO:0046872 | |
| Alju03g0091 | 1041 | Gene3D | - | 89 | 160 | - | - | |
| Alju03g0091 | 1041 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 425 | 990 | IPR023298 | - | |
| Alju03g0091 | 1041 | FunFam | Copper-exporting P-type ATPase A | 89 | 158 | - | - | |
| Alju03g0091 | 1041 | FunFam | Probable copper-transporting ATPase HMA5 | 818 | 972 | - | - | |
| Alju03g0091 | 1041 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 85 | 1034 | - | - | |
| Alju03g0091 | 1041 | NCBIfam | heavy metal translocating P-type ATPase | 409 | 1024 | IPR027256 | GO:0006812|GO:0016020|GO:0019829 | |
| Alju03g0091 | 1041 | FunFam | Copper-transporting ATPase 1, putative | 463 | 585 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju03g0091 | Alju-ChrAlju03 | 2200258 | 2209198 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju03g0091 | 40 | 1041 | Primary Pumps ATPases | AT5G44790 | 73.550 | 0.0 | 1491 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Alju03g0091 | 03 | 2200258 | 2209198 | Alju03g0091 | 03 | 2200258 | 2209198 | ECH |