Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0081 ATGTCATCGAAAAGCATTTATTCTAACAAGTGGACCTCATTTGCTGGAACCTTTGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTGACTGAGAAATGTGACGTCTATAGCTTTGGAATGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGCCTTCTACTGATGCACCAACAATAGTTGCTCATGATTTTGATTTGAAGGAAGTGTTAGACCAGAGGCTACCTTATCCTCGAGGTTTGGTAGCTGAGAAGGTGATGTTAATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCTCGCACTCGCCCATCCATGGAGCAAGTATGCAATGAGCTTGTGGTGCCAAGATCACATGTTTCTGGTTCCATAGGGTCACATGAGTTGGAGATTTGA 417 0.4149 MSSKSIYSNKWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGMLALEIIMGKHPRDLIMPSTDAPTIVAHDFDLKEVLDQRLPYPRGLVAEKVMLIARIAFTCLNENPRTRPSMEQVCNELVVPRSHVSGSIGSHELEI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0081 138 SUPERFAMILY Protein kinase-like (PK-like) 8 121 IPR011009 -
Alju03g0081 138 Pfam Protein kinase domain 6 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0081 138 PANTHER LEUCINE RICH REPEAT KINASE 2 7 125 - -
Alju03g0081 138 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g0081 138 Gene3D Transferase(Phosphotransferase) domain 1 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0081 Alju-ChrAlju03 1691417 1692311 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0081 12 121 Receptor kinase-like Gene Family AT5G49660 38.393 7.84e-17 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju03g0081 Pkinase 4e-11 CL0016