Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0074 ATGGAACCAACAAAAGCCCTAATCCCTCCTTTACTCTTTCTGTTTCTCTTCTTCAATATTTACCCGTCAGCACAGAATCCGTCACCTTCCACCGTCTCCGGCGACCACCACCGCCAAGCATTGCGCAGATTCGAAGCTCTCAAAGCTTCTCACGTCAGACTCAGCGCTTCCAATGCTTCGCCACCGTCTCCTTCTCCGTCACCGTCGCCACCACCGTCGGGTTCAAATGGTCCACGGGTATACTTAGCGACGTCGTATGGGGCGGATCCGACGGGGAGGCTGGACAGTACGGACGCTCTTCTTGCAGCGATAACAGATGCGACGAATGGTCACGGTGAAGGGTCCTTGATCGCCGGCATTGCTAATCTTGGAGGCGCACAGCTTTATCTTCAGGGTGGGAACTACTTGATCAGCCGGCCGCTCCGATTTCCGGCTGCCGGCGTTGGAAACTTTATGATCCATGGTGGGACCGTACGAGCCTCAGATAGCTTTCCATCAGATGGGTACCTCATTGATTTATCAACTACCAATGGAAATGACAAAACTACCCGTTCTTCATCCTACAATTACGAGTTCATCACCTTCAAGGACCTTCTCTTAGACTCCAACTACCATGGAGGAGGCATCTCAGTCATCAACTCTCTCCGAACCGGCATCGACAACTGCTACATCACTCACTTCACAACCAACGGAATCCTCGTCCAAGCCGGCCATGAAACCTACGTCAGAAACTCCTTCATCGGCCAACGCATCACCGCCGGCAGCGACAAAGGCGAAAGGAACTTCACAGGAACCGGAATCAACCTCCAGGGCAATGACAACTCCATCACCGACGTCGTCATCTTCTCCTCCTCCATCGGAATAATGGTCTCCGGTCAGGCCAATATAATCTCCGGTGTACATTGCTATAACAAAGCCACCGGCTTCGGAGGCACCGGCATTTATCTCAAACTCGCCGGGTTGACACAAACTAGGGTTTTGAATTCTTACATGGATTACACCAGTATTGTCGCAGAAGACCCAGTTCAGCTTCATATTTCTGGTACATTCTTCCTCGGAGATGCCAATGTTGTCCTCAAATCGGTCAACGGGGTGGTCAACGGAGTAAACATAGTGGACAACATATTTTCTGGGAATAACAATGGGGTTGAAATTGTTCATTTGGATCAATCAAATGGCAATAATTTTAAGAAAGTTGATCAGGTTGTGGTGGATCGGAACGCTGTGGTGGGGATGAAGTTGAAGAGTACGGTGGCGAAGAAGATCGTGGAAGCGAATGGGACTTCATTAATGGCGGATTTTAATGATGTTTTGCTTTTTCCCAACCTTATAAAGCATGTGCAGTATTCATTGAGCTTCGAAGGCAACACTTTCCCAAGTTATGTTCTGAGGAATGTGTCTGATAATCGTGTCGTGATTCAAACAAGTGAAGCAGTGCCTGCAAATTTATATGTTGCAGTGGATCAAAGTATATAA 1476 0.4858 MEPTKALIPPLLFLFLFFNIYPSAQNPSPSTVSGDHHRQALRRFEALKASHVRLSASNASPPSPSPSPSPPPSGSNGPRVYLATSYGADPTGRLDSTDALLAAITDATNGHGEGSLIAGIANLGGAQLYLQGGNYLISRPLRFPAAGVGNFMIHGGTVRASDSFPSDGYLIDLSTTNGNDKTTRSSSYNYEFITFKDLLLDSNYHGGGISVINSLRTGIDNCYITHFTTNGILVQAGHETYVRNSFIGQRITAGSDKGERNFTGTGINLQGNDNSITDVVIFSSSIGIMVSGQANIISGVHCYNKATGFGGTGIYLKLAGLTQTRVLNSYMDYTSIVAEDPVQLHISGTFFLGDANVVLKSVNGVVNGVNIVDNIFSGNNNGVEIVHLDQSNGNNFKKVDQVVVDRNAVVGMKLKSTVAKKIVEANGTSLMADFNDVLLFPNLIKHVQYSLSFEGNTFPSYVLRNVSDNRVVIQTSEAVPANLYVAVDQSI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0074 491 PANTHER POLYGALACTURONASE QRT3 35 490 IPR039279 GO:0004650
Alju03g0074 491 Gene3D - 83 484 IPR012334 -
Alju03g0074 491 MobiDBLite consensus disorder prediction 61 75 - -
Alju03g0074 491 Pfam Pectate lyase superfamily protein 84 308 IPR024535 -
Alju03g0074 491 MobiDBLite consensus disorder prediction 53 87 - -
Alju03g0074 491 SUPERFAMILY Pectin lyase-like 78 428 IPR011050 -
Alju03g0074 491 FunFam Polygalacturonase QRT3 83 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0074 Alju-ChrAlju03 1476924 1480122 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g0074 03 1476924 1480122 Alju03g0074 03 1476924 1480122 ECH