Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0055 ATGGCTTCATCTTCTTCCTCTACTCCATCTTCACAATCTCCAAAGAAATATGATATTTTTATTAGTTTTAGAGGCGAAGACACTCGCTTCAATTTCACAAGCCACCTTCATGATGCTCTTCGTAAAAATCACATAAATACATACATCGACCACAGACTTGAGAAAGGAGATGAGTTATGGCCATCTCTTGAGAAAGCCATTCAAGATTCAACTTTGTTCCTTATCATCTTCTCAGAGAACTATGCATCGTCCACGTGGACCTTAAAGGAGCTTACAAAAATATTAGAGTGCTCAAAAAATCAAGCTAACCTTGTTATGCCAGTGTTCTATACAATACATCCTTCTCATGTGAGGAAGCAATCTGGAAGTTACCAGAAAGCATTTGAAGAACATGAGAACAAAATCATCGACAAGCAGCAATTGCAAAAGTGGAGGGAGGCTCTCACTCATGCTGCCAATTTATCTGGTTGGGATTGTAGCTTTGATAGGGATGAGGCTGAGCTAATTGAAGAAATAGTGAATTGTGTTGTGCAAAAGTTGGGCCCTAAGTATCAAAGTGATGATTATCTAAAAGGCTTTATCGGAATTCATGAAAGAATGGTAGATGTAGAATCGTTGTTGGACAAAGATTCAAATGATGATGTACGATTTATAGGCATTTGGGGCATGGGTGGCATAGGCAAAACAACTCTTGCAAAAGCATTATTTCACAAATGGTGTTTTGCATATGAAGGGTTTTGCTTTATGGCTAATGTGAGGGTAGAATCAAAAAAACATGGAATAGATGCTTTGAGAGAAAAACTTATTTTGAAGTTATTAGGGGATAAAGAATCTCACATTGGCATGTTTGATGCAACATATCCTTATGCTATGAGCAGACTTAGTCGGAAAAAGGTTTTCGTTGTTGTTGATGATGTTGATGATCTTGGGCAATTAGAAGATTTAGCGTCGACTGGAGCTGAAGAGAGCTGGCAGAGAGTCTGGAACGGCAGTCTTGGAGAGACGGAGGCGGCTGTGTTGGAGAGTAATGTTCATTGCCTTGTTCGGGAACCACTTCCGGCGAGCTTCCTCGTCTTCTTCCAAAAGAGCGAGAACCAGAGCAAGCCAGAAAGAGAGAGAGCTCGGGAGGCAGAGCTGAACGCCGATGAGAGTTCTTCTCCGGTGAGGAAGGAGACACGTCAAAACTGA 1188 0.4116 MASSSSSTPSSQSPKKYDIFISFRGEDTRFNFTSHLHDALRKNHINTYIDHRLEKGDELWPSLEKAIQDSTLFLIIFSENYASSTWTLKELTKILECSKNQANLVMPVFYTIHPSHVRKQSGSYQKAFEEHENKIIDKQQLQKWREALTHAANLSGWDCSFDRDEAELIEEIVNCVVQKLGPKYQSDDYLKGFIGIHERMVDVESLLDKDSNDDVRFIGIWGMGGIGKTTLAKALFHKWCFAYEGFCFMANVRVESKKHGIDALREKLILKLLGDKESHIGMFDATYPYAMSRLSRKKVFVVVDDVDDLGQLEDLASTGAEESWQRVWNGSLGETEAAVLESNVHCLVREPLPASFLVFFQKSENQSKPERERAREAELNADESSSPVRKETRQN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0055 395 MobiDBLite consensus disorder prediction 365 395 - -
Alju03g0055 395 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 324 IPR044974 GO:0006952
Alju03g0055 395 MobiDBLite consensus disorder prediction 364 395 - -
Alju03g0055 395 PRINTS Disease resistance protein signature 217 232 - -
Alju03g0055 395 PRINTS Disease resistance protein signature 293 307 - -
Alju03g0055 395 Pfam NB-ARC domain 203 315 IPR002182 GO:0043531
Alju03g0055 395 Gene3D - 185 327 IPR027417 -
Alju03g0055 395 SMART till_3 16 154 IPR000157 GO:0007165
Alju03g0055 395 Pfam TIR domain 16 190 IPR000157 GO:0007165
Alju03g0055 395 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Alju03g0055 395 Gene3D - 11 184 IPR035897 -
Alju03g0055 395 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 181 - -
Alju03g0055 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 318 IPR027417 -
Alju03g0055 395 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0055 Alju-ChrAlju03 1211343 1216573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0055 9 318 WRKY Transcription Factor Family AT4G12020 30.547 9.12e-31 123