Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0043 ATGATGGCATCGTCCCAGGTTGAAATTGCTCTAACATCCCCTTTTGGTTGTGTTTTGAGAAAATATAATCATCGTGAGAGATTCAGGGAAAGTGCTTCTTCTCGAGTTTCTTCATCATCACAAGCAGCAACCTTCCATAACAATGACAGAAGAAGCTTTGTCATCAGAGATAATGCGACACCGCTACAAGTTGATGTGAAGAACAATATTAACAGCAACAACAACGTAGGATTCACGAAGAAGGAGAATAAAGAAGATGAATCATTATCCTCATCCTCAAACAACAGAAATGTTAACCCTAGGCAATCACGGATTCTGGATCGATGGGCTGCAAGAAAAGCAAAAGAAATGGTATCAACGATTGAGACAGAAGCTGAACTTTTAGAGAATATGGGTTCTAATTCTAATTCTTCTACTTCATCATCGTCAGAAACAATAATGAATAATCGTGGAGCTTCATCTCTTGTCCAAATATGGGAAAAAAGGTTAAATAACCTGAACCAATCATCACCACTCAAGTGCAATACAGTTACAAGCAGAACATCATCGCTTGGATCATCAGATGTTGGAGAAATATTCATGGATGAAACATCATCGTCATCATCATATTCAGATTGGGTGGTAGGTGATACAAATATTGAAGCTACGACATGTTCAACGCCAAAGGTGGCAGATATTATAAAGAGGTTGAAGGAGAATAAGTATGAACAAAGTAATAATAATTCAAATAATAATAATATGATGATTATGATGGGATCCTCGGGTCTGTCAAGTAGTAGATCGGAACAAGGACAACACAACACGAGCTCGGTGGTTCCTTCACCTCGCATCCGAGGCCGACGAGCATTTACAGATTTGCTGATGCAGATGGAACGTGATAGACTTGGAGAGCTCAACAATTTGGCTCAGCTTGCACCTGTTTCCAACTTTTCCCAAAGAGGTCGAGGTCGTATTCAGTCACTCATGCGGCTTAGATTGTTGAAACGACACCATGAATCAACAATATATGAAGTGAATAGACCACCAAAAGGGTCCTCAATTATGCATTTGAGGGAAAGATTTAATGCAAAAGTGAAACAAGGAAGTACAACTGAGTCAGAAATAGTTGGTTCAAGAAATACCTGCCCTAATCAAACCGAAAACCCAAAGGGTGAGCACAGGTTGAATCCGATCAGGACGAACCAGGCTATCAATGTGACAAATGACTACCAAAATGCTAATGATTACTCATCAGCAGTGTGTGCTCAAAAACCAGAGTCTCAAACAAATGAAGAAGAAGACAGAGCTCATGCACGGTCATCAAAAACAGTATTCTCAGAGGCTCAAGACATTATTGCATCACAAGAAGTAGGCGAGACAAGTAATTGTTGCAGTAATATGGTTGATTCATCATTCGCAAATCGTCATGAGACAAAAGATGAAGCAGACATGGCAGAGGTAAAGCAGCTGGATAATATATATGGTGCCAATGAAACTGAAATCACCAATAATAATTATACGGATGAAACAAGAACAATGAGTAATATTGAAGAAGATCATGAATATGCAAGTGAAAGCATCAATGATTATGATCATGATGACGAAGAAAATTATTACGATTGGATGAGTCCTATTGCTCGCCCTAGAAGCTATTGGGAAGATCGTAGACAAGCCTGGTACAAGGAGATGCTTGACACTACTACTTCTGATGATAAAGAAGAGATACGCCAACTTCTTGAACGAAGAAGAGTTTCAACTTTGCTTTCAAGTGAAATGAGAGAAAGAATGGACAAATTGATGGAATATCACATAGGAACCCAAACACAATTTATGAGTAGTAGCCAAGAAGATGATGAAGACAATAGTGGAGGTGGGAGCAGAATGGGGCAACTAATGTCATTTTTGCAACAACACATACAGCGTCATGGCCATGACCTTGAAGAAAAGGAAGAAGCTAAAAAACAAGAGGCACGAGAAGAGCAAGAAGAAGAAGAAGAAGGAGAGAGCTTGATGAGTAATGGTGGTAGTTATAATGAAACCAGCTGTGATGATGGTAATCAGTCATCGTCGACACAGATTGTGAGTTCGTCTTCTCCAAATATGTCATCATGGAGCTATAGAGAGAACGAAGCCACCAGTGATGATTCTGAGGACAGAGTTGATGAGTCTGTTACATGTTCAATACAACCTTCTCCATGTCAATCTTTCTACCAAGATTGTCGCCAATCCTCCTCCACCATTAATCCTCATCCAATGGAAATGGATTTGATATATGATATGAGGGGGCAAATGGAGCAACTGTATAGAGAAATGGCCGAGATAAGGAAATCACTAAAGAGCTGCATGGATATGCAGATGATGCTACAGAAATCAATGAAGCGCGAAGTTAACAGCACAGTTAGAGAAAAGAAGACGAAGACGAAGAAGAAGGGCAATGAAGAGAAGGGAGATGAAAAGAAAGGGAAATGCTGTATTTGCTATGAGATGAAAGTGGACTCAGTTTTGTATAGATGTGGGCACATGTGTACGTGTATCAAGTGTGCCAATGAGTTGCAATGGAACAGTGGCAAGTGCCCTATATGTCGATCTCCCATAGTTGATGTTGTTAGAGTTTATTTGCATTCTTAG 2607 0.3982 MMASSQVEIALTSPFGCVLRKYNHRERFRESASSRVSSSSQAATFHNNDRRSFVIRDNATPLQVDVKNNINSNNNVGFTKKENKEDESLSSSSNNRNVNPRQSRILDRWAARKAKEMVSTIETEAELLENMGSNSNSSTSSSSETIMNNRGASSLVQIWEKRLNNLNQSSPLKCNTVTSRTSSLGSSDVGEIFMDETSSSSSYSDWVVGDTNIEATTCSTPKVADIIKRLKENKYEQSNNNSNNNNMMIMMGSSGLSSSRSEQGQHNTSSVVPSPRIRGRRAFTDLLMQMERDRLGELNNLAQLAPVSNFSQRGRGRIQSLMRLRLLKRHHESTIYEVNRPPKGSSIMHLRERFNAKVKQGSTTESEIVGSRNTCPNQTENPKGEHRLNPIRTNQAINVTNDYQNANDYSSAVCAQKPESQTNEEEDRAHARSSKTVFSEAQDIIASQEVGETSNCCSNMVDSSFANRHETKDEADMAEVKQLDNIYGANETEITNNNYTDETRTMSNIEEDHEYASESINDYDHDDEENYYDWMSPIARPRSYWEDRRQAWYKEMLDTTTSDDKEEIRQLLERRRVSTLLSSEMRERMDKLMEYHIGTQTQFMSSSQEDDEDNSGGGSRMGQLMSFLQQHIQRHGHDLEEKEEAKKQEAREEQEEEEEGESLMSNGGSYNETSCDDGNQSSSTQIVSSSSPNMSSWSYRENEATSDDSEDRVDESVTCSIQPSPCQSFYQDCRQSSSTINPHPMEMDLIYDMRGQMEQLYREMAEIRKSLKSCMDMQMMLQKSMKREVNSTVREKKTKTKKKGNEEKGDEKKGKCCICYEMKVDSVLYRCGHMCTCIKCANELQWNSGKCPICRSPIVDVVRVYLHS 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0043 868 MobiDBLite consensus disorder prediction 785 811 - -
Alju03g0043 868 PANTHER BNAC05G24000D PROTEIN 2 868 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 664 702 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 788 811 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 360 384 - -
Alju03g0043 868 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 790 867 IPR013083 -
Alju03g0043 868 CDD mRING-HC-C3HC5_NEU1 813 865 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 235 277 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 236 274 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 600 718 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 420 434 - -
Alju03g0043 868 SUPERFAMILY RING/U-box 815 861 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 416 435 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 633 653 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 360 388 - -
Alju03g0043 868 Coils Coil 111 131 - -
Alju03g0043 868 MobiDBLite consensus disorder prediction 66 104 - -
Alju03g0043 868 ProSiteProfiles Zinc finger RING-type profile. 816 855 IPR001841 -
Alju03g0043 868 Coils Coil 632 660 - -
Alju03g0043 868 Pfam Zinc finger, C3HC4 type (RING finger) 813 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0043 Alju-ChrAlju03 1031265 1035505 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0043 798 868 C3H Transcription Factor Family AT3G06140 36.620 4.06e-08 54.3