Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0030 ATGCGTAACAGTAGGGAGCTTTGTAGAAATTTTCAGCGAGGCAGCTGCCAATATGGAGAAAGGTGTAAATTTCTTCACAGTCTGCCACAACAGCAAAAACAAACAACCAATCCTTTTGGATTTGGGTCCCACTCCAGTTCGCACCAAAAACAAACTACCAATCCTTTTGGATTTGGGTCCCACTCCGATTCCCAGCAACAGCATAAGACAAATCCTTTTGGATTTGGTGTGCAGAATAGCTCCCAGTCAGCCGGGGGTGCTAATTCAGAATTCAAACACCAGTTCAAGCCTTTTGATAACAAATGGACTCGTCCTTCTTCCTCACCCCAGAATAGTGCTTCGCGAACAACTGATGCCAATTCTCGAGATCATAAGTGCACAGATCCTGAAACTTGCAAACGTCAGATTGTAGACGATTTTGAGCAAGAGAGAACACTTTGGAAGCTTACATGCTATGGTCATTGTAAAGGTGGTCCTTGTGACATTGTTGGTGATATTAGCTATGAAGAATTGCGGGCAGCTGCATATGAGGATGCTAATCGTGGGATGACATTACAATCAATTGTTGAGAGAGAGAGAAATCTACTAAGTTCCAAGTTAGCAGAGTTTCAGAACCTTCTTCGTGAACCTTACAAAATACAGCTGAGTTCTTCTCTTACAAGTGATAAGTATCAATCTCCTGGAATTGATGCAAAGCCATTTTCAAGGACTTCGCAATATAATGATCCTCTGTCTGTCTCTAGCTTTAGTCAACTAGGGGCATCTTTGAACACGGGTATTGAAAGGTCTTCTGCACCCCCAGTAGATACTCTGGCTCAACCTATCTCCTTTGGAAGTAGAGGAAATCCGTTGGCATCCAATGTGACAAACCAAACTGGCGGAGGCATTGCAGGTGGCCTAATTAACCTCTTTCCCACATCAGCAGAAGTTCCAAAGTTTCCCAGCGGTTCTCCACAGCAATTGTTTACTGCGAGCAATGGCACTAGTTCTGATACAATGTTTCCAGCAAGCATGGGCGTTCAGTTGTCAAGCAAGTCCAATGAGAATGTCTCTGGAGATACCAGTATTTGGTTAAAAGAGAAATGGACTCCTGGAGAGATTCCGGAAGAAGCTCCTCCTGATGCATTTGTAAGATTTCTCTTGAAAGCAAAGGTTTTGAGTTCAAGGGATCATAAGCATGCTATCAAGACTTTGTTGAACAAGGAGTCAATATGGTTCAATTCTTAG 1227 0.4311 MRNSRELCRNFQRGSCQYGERCKFLHSLPQQQKQTTNPFGFGSHSSSHQKQTTNPFGFGSHSDSQQQHKTNPFGFGVQNSSQSAGGANSEFKHQFKPFDNKWTRPSSSPQNSASRTTDANSRDHKCTDPETCKRQIVDDFEQERTLWKLTCYGHCKGGPCDIVGDISYEELRAAAYEDANRGMTLQSIVERERNLLSSKLAEFQNLLREPYKIQLSSSLTSDKYQSPGIDAKPFSRTSQYNDPLSVSSFSQLGASLNTGIERSSAPPVDTLAQPISFGSRGNPLASNVTNQTGGGIAGGLINLFPTSAEVPKFPSGSPQQLFTASNGTSSDTMFPASMGVQLSSKSNENVSGDTSIWLKEKWTPGEIPEEAPPDAFVRFLLKAKVLSSRDHKHAIKTLLNKESIWFNS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0030 408 MobiDBLite consensus disorder prediction 33 128 - -
Alju03g0030 408 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 5 27 IPR000571 GO:0046872
Alju03g0030 408 SUPERFAMILY CCCH zinc finger 5 30 IPR036855 GO:0046872
Alju03g0030 408 SMART c3hfinal6 3 28 IPR000571 GO:0046872
Alju03g0030 408 MobiDBLite consensus disorder prediction 100 117 - -
Alju03g0030 408 Gene3D - 1 97 - -
Alju03g0030 408 PANTHER MAKORIN-RELATED 7 257 IPR045072 GO:0000209|GO:0061630
Alju03g0030 408 MobiDBLite consensus disorder prediction 33 89 - -
Alju03g0030 408 ProSiteProfiles Zinc finger C3H1-type profile. 2 29 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju03g0030 zf-CCCH 7.8e-10 CL0537