Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0024 ATGTATCCCAGACTGATTCGCTCGCACGAAGGGATGGTTGGTCAGGAAGATATGCAGGGCGGTGGGTCAAACCACAGCGGAGACCCATGCCTGGTGTTGACCGCCGATCCCAAACCTCGTCTCCGTTGGACCCAGGACCTCCACGAACGATTCATCGATGCTGTTACTCAGCTTGGTGGTGCTAGCAAAGCCACACCAAAAGCAATCATGCGGACCATGAATGTAAAGGGTCTGACTTTATTTCATTTGAAGAGTCATCTTCAGAAATACAGACTTGGCAAGCAATCAGGCAAAGATATGGTTGAGGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTCATACCGACAAGTCTTCCCCAAAGTTGCCAGCTTCTGATACAAACGAGGGTCATGAAATCAAGGAGGCTTTAAGAGTACAGATGGAAGTACAAGGTGAACTACATATGCAAGTGCAGGCAGAGAAGCATTTGCAGATTCGCCAGGATGCAGAGCGAAGATACATGGCCATGCTCGAAAGGGCTTGCAAGATGCTGGCGGATCAGTTTATTGGTGCTACAGTTATAGATACAGACAACCAAAAATTTCAAGGACTATATGGAAATAAAGCACCAAGAGCTCCCTTTGTTGACCCTCTTGGCTTTTACTCCTTACCGTCTACTGGTATAACCAGAGCAGTTTATGCTTCAGGAGAAGAATTCCCTAATCTCCATTCCCAAAGGGCTGACTGTTCAACCGAAAGTTGCCTAACATCGCAGCATGAAAGCCCCGGAGGTTTGACATTGGAAGGATCTCCCATTAGTGGTGGGGCAAACAAGAGGATGTTGAGCTTGGAATCCATGACAGCAGCCCCTTTAATATGGAGTCAAGCCACCATGAGAACTCAAGGCATCAATGTGGCCCAAGGTAACCTACATAGAATAACTGAGTATGGCATGTAG 942 0.4703 MYPRLIRSHEGMVGQEDMQGGGSNHSGDPCLVLTADPKPRLRWTQDLHERFIDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMVEGCKDGSYLLESPHTDKSSPKLPASDTNEGHEIKEALRVQMEVQGELHMQVQAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDNQKFQGLYGNKAPRAPFVDPLGFYSLPSTGITRAVYASGEEFPNLHSQRADCSTESCLTSQHESPGGLTLEGSPISGGANKRMLSLESMTAAPLIWSQATMRTQGINVAQGNLHRITEYGM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0024 313 MobiDBLite consensus disorder prediction 7 27 - -
Alju03g0024 313 Pfam MYB-CC type transfactor, LHEQLE motif 133 178 IPR025756 -
Alju03g0024 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 256 IPR044848 GO:0003700
Alju03g0024 313 MobiDBLite consensus disorder prediction 105 129 - -
Alju03g0024 313 FunFam Myb family transcription factor 37 95 - -
Alju03g0024 313 Gene3D - 37 95 - -
Alju03g0024 313 Pfam Myb-like DNA-binding domain 41 91 IPR001005 -
Alju03g0024 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 95 IPR017930 -
Alju03g0024 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
Alju03g0024 313 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0024 Alju-ChrAlju03 681044 684725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0024 22 274 G2-like Transcription Factor Family AT3G24120 43.774 2.21e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju03g0024 Myb_DNA-binding 3.9e-06 CL0123