Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g0021 ATGTATCAGCCAAACAGTGTTACTAGTTTAAGTCTTCTAGGAAGCAACTCATTGGTACATAGTCAGCAATTTGATCGTGGTGGCAGTACAATGGACCCAGTCAATGGAGGGAATAGTCTCACCAATAATCCCCATATGAGCTCAAAGCAACGGCTACGCTGGACACATGAGCTCCATGAACGCTTTGTTGATGCTGTGGCACAGCTTGGTGGGCCTGATCGTGCCACACCTAAAGGTGTCCTCAGAGTGATGGGTGTACAAGGCTTAACAATATATCACGTCAAAAGCCATCTGCAGAAATATCGTCTTGCTAAATACCTCCCTGACTCCTCTTCTGATGGGAAAAAAGCTGACAAGAAAGAAACAGGGGATATGCTTTCAAATCTGGATGGTTCACCAGGGATGCAGATTACTGAAGCACTAAAGCTGCAAATGGAGGTTCAGAGACAGCTACAGCTTCGGATTGAAGCCCAGGGTAAATACTTGAAGAAGATAATTGAAGAGCAACAGCGGCTCAGTGGTGTTCTTTCCCAAGCACCCTGCTCTGGGGATGCAGCCTCAGTGCCAGTTGACACCTGCCAAGACCCTGACAATGAGAATGACCCGTCAACCCCTGCCCCTACATCTGAGTGCCCCCTTCAGGAAAAAGTTGCCAAAGAACGTGCTCCGGCGAAGAGTCTTTCAATCGATGAATCTTTTTCATCTCACAACGAACCATTAACACCAGATTCTGGCTGCCATGCTGGTTCCCCTACCAACAGCCCTAGAGAGAAGAGAATGGCAAAAAAGCAGCGGGTGAGTACGGAGGGAGCATATTCTAAACCTGAAATGGTGCTTCCACATCAGATACTTGAGTCGAGCATGTCATCGAGTCAGTCATTAAATGGAGTGTTTTCCTGCCCATGA 906 0.4746 MYQPNSVTSLSLLGSNSLVHSQQFDRGGSTMDPVNGGNSLTNNPHMSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKETGDMLSNLDGSPGMQITEALKLQMEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSQAPCSGDAASVPVDTCQDPDNENDPSTPAPTSECPLQEKVAKERAPAKSLSIDESFSSHNEPLTPDSGCHAGSPTNSPREKRMAKKQRVSTEGAYSKPEMVLPHQILESSMSSSQSLNGVFSCP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g0021 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 43 292 IPR044848 GO:0003700
Alju03g0021 301 MobiDBLite consensus disorder prediction 109 125 - -
Alju03g0021 301 MobiDBLite consensus disorder prediction 22 46 - -
Alju03g0021 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Alju03g0021 301 MobiDBLite consensus disorder prediction 228 251 - -
Alju03g0021 301 MobiDBLite consensus disorder prediction 108 133 - -
Alju03g0021 301 MobiDBLite consensus disorder prediction 193 210 - -
Alju03g0021 301 Gene3D - 48 107 - -
Alju03g0021 301 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Alju03g0021 301 FunFam Myb family transcription factor 48 106 - -
Alju03g0021 301 Pfam MYB-CC type transfactor, LHEQLE motif 135 171 IPR025756 -
Alju03g0021 301 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Alju03g0021 301 MobiDBLite consensus disorder prediction 177 278 - -
Alju03g0021 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g0021 Alju-ChrAlju03 662678 665436 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g0021 84 291 G2-like Transcription Factor Family AT2G01060 65.000 4.64e-89 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju03g0021 Myb_DNA-binding 1.9e-08 CL0123