Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3884 ATGGGTCGTGATTCCGCAACTTCACTCGCTCCGGGCTTCCGTTTCCACCCCACCGACGAAGAACTCGTTCGTTACTACCTCAGACGCAAGGTCTCCGGCAAATCCTTTCGCTTGGACCCTATCGCCGTCATCGAAATCTATAAATCTGAACCTTGGGACCTTCCATGTCAGTCGAAGCTGAAAAGCAGGGACTTGGAGTGGTACTTCTTCAGTGCGCTGGACAAGAAGTATGGAAATGGGTCGAGGACGAATCGGGCTACTGAAAAAGGATACTGGAAGACTACGGGCAAGGATCGCCCAATTCGACACAGCTCTCGTACCATCGGAATGAAGAAGACCCTCGTTTATCATAGTGGGCGGGCGCCGCGCGGTACCCGTACCAATTGGGTCATGCACGAGTACAGATTAGCTGATGAAGAATTGGCAAAAGCGGAAATACCACAGGATACGTTTGTGCTTTGTAGGATTTTCCAGAAGAGTGGTTCTGGGCCAAAGAATGGGGAGCAGTATGGTGCCCCCTTTATAGAGGAGGAATGGGAAGATGATGATGTTACCGTGGCTCCACTGCCCAGTGATGAGGCTGCAACTGATGAAATAATTGTCGGTGATGATGCGTATGTTGAAACGGATGACCTTGACCAGTACCTGGATATGGGTGTGGCTTCTGAAGGTGCTGGTCATGCATTAAACTTTTATCATGGGGAGTGCAGCAGTTATCCTGAGCATTCCCAAGAATTGATTGAAGATCAAGAGCTCTTGGTAGGAACTTCTGGGACTTGTGAGCCTCAAGATGACCTTTTATCGAATAAGCCTGAGCAACATGCTTCAGATAGCAAACCAGTGAAAGATGGCATCAAGGCTGAAGCAACTCATGAAGGATATTTCTTGAATGACAATTGCACTTTTGATGAGACATACTTGGATGCTACTGATGGATCATTCCTGGAAACTGATGATCTGGCAAATCCTGCTGATACTGATGTACTTGAAGAGTATCTTACATACTTTAATGGCGTTGATGATATTTCCCAGTATATCTCTTTCGATTCTCCTGAGCTGACAGGGAGTGAAAACCCTGATGCTGACCAAGGACTACCTTTAACCCAACTGAATGTGGGCGGAGAATCCAAGGATATTCTCATGGCAAGCAAAATTGATGTGAAAGCCCATTCTAGCAAACAAGCTTCTTCTTTGAAGCAGGATCTAGAGGCATCAAACTTGGTGTCAGGAAATACATACCCATTTATGAAGCAGGCCAGTCACTTGTTGGGCAGTATCCCTGCTCCCCCTGCATTTACTTCAGAGTTTCCTCCTAAAGAAATTGCTCTCCGTCTGCATTCTACGGGTCAATGTTCCAATTCAGCTCATGTAACTGCAGGTATGATCAGAATAACCGACTTCTCTGTAACAGACAACAGGATGGACTGGATGCTGGGCAAAAATGGAGAGTTCAGTGTTGTAATCTCATCGTGCTTTTGGCCTGCTGTTAACTCTCTTGCTTCAGTGCCTATTTCTGGTTTACTCTCTGAGAAGTCTGCATATGTAGTGTCACACGGCTGGATATTCTTAGTCTTCTTTTCAGTGCTGGTTCTTTCACTGAGTTTCAAGATTGGAAGTTTCATGTATACCAGCAAATGA 1638 0.4603 MGRDSATSLAPGFRFHPTDEELVRYYLRRKVSGKSFRLDPIAVIEIYKSEPWDLPCQSKLKSRDLEWYFFSALDKKYGNGSRTNRATEKGYWKTTGKDRPIRHSSRTIGMKKTLVYHSGRAPRGTRTNWVMHEYRLADEELAKAEIPQDTFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDDVTVAPLPSDEAATDEIIVGDDAYVETDDLDQYLDMGVASEGAGHALNFYHGECSSYPEHSQELIEDQELLVGTSGTCEPQDDLLSNKPEQHASDSKPVKDGIKAEATHEGYFLNDNCTFDETYLDATDGSFLETDDLANPADTDVLEEYLTYFNGVDDISQYISFDSPELTGSENPDADQGLPLTQLNVGGESKDILMASKIDVKAHSSKQASSLKQDLEASNLVSGNTYPFMKQASHLLGSIPAPPAFTSEFPPKEIALRLHSTGQCSNSAHVTAGMIRITDFSVTDNRMDWMLGKNGEFSVVISSCFWPAVNSLASVPISGLLSEKSAYVVSHGWIFLVFFSVLVLSLSFKIGSFMYTSK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3884 545 FunFam Nac domain-containing protein 86 18 162 - -
Alju02g3884 545 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Alju02g3884 545 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Alju02g3884 545 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Alju02g3884 545 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Alju02g3884 545 MobiDBLite consensus disorder prediction 261 281 - -
Alju02g3884 545 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 243 - -
Alju02g3884 545 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3884 Alju-ChrAlju02 58033331 58036332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3884 1 537 NAC Transcription Factor Family AT5G04410 44.655 8.87e-146 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g3884 NAM 4e-37 No_clan