Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju02g3877 | ATGACAGATTTTCAAGCGCTACAACAGAAGCCTGAATCCACTGATGCCCATGCTGAGTTTGAACGTGGGCTGGAGGACTTTATGCGGGACCACTTGGATGATTGCATGTCCTTTGCTTCATGTAGTTCTGCCCGAACTCAGGGTGGGGACGATGATGAGGGTGATCAGCTAGTTAGAAGGAGAAGAAGATCTGATCTTGAGGATGATGATTTAGCAGAGTCATCAGCTGTACGCCGGCGCCACTCACGGATTTTGAGCAGATGGGCTGCCCACCAGGCCCAAGAAATGATAACTACAATTGAGAGGAGGAACCGGGAGTCTGAGTTGATGGCACTTGCAGGACTACACACAGTCTCAATGTTGGACTCCTCTTTTTTGAGGGGATCACAGACTCCAACTTCTGGCCAGGAGGGGGCTGTAGAGAGGCCCAGCACTCAGGCTTCTGCTATTCTTCAGATGTGGCGTGAATTGGAGGATGAACACTTACTTAATAGGGCACGTGAAAGAATGAGGGAAAGGTTGCGTCAACAAAGGATTGCTGACTCTAATGCCAATGGATCAAGTACCATGTCAGATAGTCGGGGAAGTGAGAATCAGGGGAGTTTGGTGGATGCTAGTGAAAGTGAAAATGATTATGGGACTTGGTCACATGATCAGATTCCATCACCGCATGAAAATAGTGACCATAATGGGTCTAGCCGGGAGCAATCTCCTGACCTTGGTGAAGTTGAGAGGGAGAGAGTTAGACAGATTGTGCGGGGATGGATGGAAAGTGGCATCAGTGATCATTCATCTAATGCAAGTCAGAGAAACAATAATCACAGAGCAGAGTGGCTTGGTGAAACAGAGCGTGGAAGAGTAAGAATTGTCAGGGAGTGGGTGCAAATGACAAGTCAGCAGCGAGGTTCTCGTGGGAGCCGGAGGGATAGCCAAGTCAATGAAAGTGGTTCTCGAGTTGAGAGAGTCCGCGATGGACTGTTAACTGATCATGATGAGAGCCAGCCAGAGCATGTACGCAGAGATTTGTTGAGGTTGCGTGGAAGACAAGCTCTGGTTGATTTGCTTGTGAGGGTTGAAAGGGAAAGACAGAGAGAGCTGCAGGGTTTGTTGGAGCACCGTGCTGTTTCTGATTTTGCTCATCGTAACCGAATTCAGTCATTACTCAGAGGTAGATTCCTCCGAAATGAAAGAACTATAGAAGATGAGAGGCCTCCATCTGTGGCTGCAAATGAATTAGTTCAGTTAAGACAACGTCACACAGTCTCTGGTTTAAGAGAAGGGTTTCGCTCAAGATTAGAAAATATTGTTCGTGGTCAAGCTAGCAGCAATTCTGATGCCACATCTAATAGTAATATCAGTGAAACTAGAAGTGACGTGAACCAAGAAAACAATTCAATAGATGCCCAGCATGAAAGTTATCAACAAAGGCAGATTAGGAGCCTTGAAACTGATGTGCAGCAGTTGGCTGATCAAACAGGAACTTTTGAAAGTAGCACTAGTGAGAGTATAAGTTGGCAAGAAACTAGTAATCAAGGAGGGAACTGGCAGGAACAAGTTACTGAAGATGGTCGTGGAAATTGGCAACAGAGAGCTTATGGTCCATTGAATCAGTTAAGAGATGGAAGAGCTGTTAATGATTGGCGGCAGGATTCTCCAACAAACGTAGAAGGGGAAGATACACATCCACGAGAAGCTCAGGGAATTTGGCATGAGGCTAATTCAAGGGAAGCTGCTGGTAATTGGTCAGAAGAACCTTCTGGTCCTCCAAGGAATCGACGTGGTGTTCCTTTTAGGAGATTCAATAGATTTCATCCACCTGACGATGACAATGTATATAGCATGGAGCTTAGAGAACTTTTGAGCAGGAGAAGTGTTTCCAATCTTCTTCGCAGTGGTTTCCGTGAAAGTCTGGACCAATTAATCCAGTCATATGTGGAAAGGCAAAATCGTGCACCTATTGACTGGGATTTGCACAGAAACTTGCCAACGCCAACTCCTGCCTCACCTGATAGGGATCCTGAACAACAGGCGGATGAACGTAATGGGGTTCAACATGATGCCATTAATAGGCCTTCTCTAGTGTTGCCATCTCCTCCAGTTCCTCCACCTCAACCACTTTGGCACCAGGACTTGCATCAGACTGGATGGTCTCGCCATAGCATGCATCGATCTGAAATTGAATGGGAGATAATCAATGATTTGAGATCAGACATGGCAAGACTTCAGCAAGGCATGAATCACATGCAGCGGATGTTGGAGGCTTGCATGGATATGCAACTGGAGTTACAGCGCTCTGTCAGGCAGGAAGTGTCTGCAGCGCTGAATCGTTCAGCGGGTGAAAGTGGAATGGGGGTCGAGACATCTGAGGATGGCTCTAAATGGGGTCATGTGAAAAAAGGAACTTGTTGTGTTTGTTGTGATAGCCATATTGATTCGCTCTTGTACAGATGTGGTCACATGTGCACTTGTTCAAAATGTGCCAATGAATTAGTTCGTGGAGGAGGAAAGTGCCCTTTATGCCGAGCACCTATTGTGGAGGTGATCCGAGCATATTCCATTGTGTAA | 2565 | 0.4647 | MTDFQALQQKPESTDAHAEFERGLEDFMRDHLDDCMSFASCSSARTQGGDDDEGDQLVRRRRRSDLEDDDLAESSAVRRRHSRILSRWAAHQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQTPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARERMRERLRQQRIADSNANGSSTMSDSRGSENQGSLVDASESENDYGTWSHDQIPSPHENSDHNGSSREQSPDLGEVERERVRQIVRGWMESGISDHSSNASQRNNNHRAEWLGETERGRVRIVREWVQMTSQQRGSRGSRRDSQVNESGSRVERVRDGLLTDHDESQPEHVRRDLLRLRGRQALVDLLVRVERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTIEDERPPSVAANELVQLRQRHTVSGLREGFRSRLENIVRGQASSNSDATSNSNISETRSDVNQENNSIDAQHESYQQRQIRSLETDVQQLADQTGTFESSTSESISWQETSNQGGNWQEQVTEDGRGNWQQRAYGPLNQLRDGRAVNDWRQDSPTNVEGEDTHPREAQGIWHEANSREAAGNWSEEPSGPPRNRRGVPFRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQNRAPIDWDLHRNLPTPTPASPDRDPEQQADERNGVQHDAINRPSLVLPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIINDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGESGMGVETSEDGSKWGHVKKGTCCVCCDSHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVIRAYSIV | 854 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 258 | 279 | - | - | |
Alju02g3877 | 854 | ProSiteProfiles | Zinc finger RING-type profile. | 802 | 841 | IPR001841 | - | |
Alju02g3877 | 854 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 110 | 853 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 655 | 681 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 307 | 335 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 485 | 522 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 125 | 146 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 179 | 221 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 295 | 335 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 176 | 244 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 48 | 70 | - | - | |
Alju02g3877 | 854 | Coils | Coil | 731 | 751 | - | - | |
Alju02g3877 | 854 | CDD | mRING-HC-C3HC5_NEU1 | 799 | 851 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 435 | 464 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 259 | 275 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 41 | 70 | - | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 535 | 597 | - | - | |
Alju02g3877 | 854 | Pfam | Zinc finger, C3HC4 type (RING finger) | 799 | 846 | - | - | |
Alju02g3877 | 854 | SUPERFAMILY | RING/U-box | 801 | 847 | - | - | |
Alju02g3877 | 854 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 789 | 852 | IPR013083 | - | |
Alju02g3877 | 854 | MobiDBLite | consensus disorder prediction | 552 | 570 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju02g3877 | Alju-ChrAlju02 | 57921627 | 57926716 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju02g3877 | 766 | 848 | C3H Transcription Factor Family | AT3G06140 | 31.325 | 6.75e-07 | 50.4 |