Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3869 ATGCAGGGATGGAATTTGGCTTGAGATAAATGGCCTGGACATATGGCTAGAAAATGGGGTTGGTTTTCTGCAGTCAAGAAAGCTATCGTTGGTTTTGCTGATTACAAGAAAGATCAGAAAAACAATAAGTTGAAGACAACATGGCCTGCCGAACCCGCAGATTTGGAACCAGCTCAGTCATCCAAAGAAGAACCAACATTTGATGTTGCTCCTCCTCCCTCCATTGGTACTGATCAGGAAAAGATCAATGAACCGATCATCAAGCAAGCAGCTTATTCGGTGGATGATGATGATGCCACTAGTGCTGTTGCAGCAGCAGATGCTGTAACTGCTGATGATGCACAGGCCCCTGAAGAGGTTGTTCAACCAGCAAGTCCGCCTCATTACTTGGAGAAGACAAAGGAAGAAATAGCTGCCATCAAAATTCAGACTGCATTTCGAGGGTTTTTGGCAAGAAGAGCACTGCATTCATTGAGAAGGTTGATGAGGTTGAAAACATCGATACAAGGGCACTGTGTGAAGCAGCAAGCAGCAGAGTCCTTACGATGCATGAGGACTATTGCAAAGGTGCAGTCTCAGATTCGTGAGAGGAGAATTAGAATGTCTGAGGAGAACCAGTCCCTTCAGCGCCAACTGCAGGGCAAAAATGAAAAGGAACTCAATAAGCCCCAAACCATTGGTGGAGAAGATTGGGATGTTAGCACGAAATCTAAGGAAGAAATTGAAGCAAGGTTGTTGGACAGAAAAGAAGCAGCAATGAGAAGAGAGAAAGCTCGAACGTATTCATCCATACATCAGCAAGCATGGAGGAAGCAGCAGGCTTCAAAGAGTGGAAAGAGGAGGACGTTGAATCCAGACTGGAGTTGGAGATGGGGGGAGCGGTGGATGGGGTCACGGCCGTGGGATGAGAGGCGTGGCGGTTCAGAGGGCGATGGCCACCGTGCCCAGAAGCACCAGCGGAGGCATAGCATTTCAGGATTGTCGGTAAGAGACGATGAGGACAGCGTGGCCAGTAGTTGTGTTGCACCTCCCAAATTGCCTCCTCTCTCTCCAGACACCAACACTTGTCCCTCTGCTTCAACTTCTAAGAGGCATTCTTGTCCCCCTCACTTTCTTCCAACATCACCAACCGCCCCTCCCCTCTGA 1146 0.4852 MQGWNLAXDKWPGHMARKWGWFSAVKKAIVGFADYKKDQKNNKLKTTWPAEPADLEPAQSSKEEPTFDVAPPPSIGTDQEKINEPIIKQAAYSVDDDDATSAVAAADAVTADDAQAPEEVVQPASPPHYLEKTKEEIAAIKIQTAFRGFLARRALHSLRRLMRLKTSIQGHCVKQQAAESLRCMRTIAKVQSQIRERRIRMSEENQSLQRQLQGKNEKELNKPQTIGGEDWDVSTKSKEEIEARLLDRKEAAMRREKARTYSSIHQQAWRKQQASKSGKRRTLNPDWSWRWGERWMGSRPWDERRGGSEGDGHRAQKHQRRHSISGLSVRDDEDSVASSCVAPPKLPPLSPDTNTCPSASTSKRHSCPPHFLPTSPTAPPL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3869 381 Pfam IQ calmodulin-binding motif 138 155 IPR000048 GO:0005515
Alju02g3869 381 MobiDBLite consensus disorder prediction 298 316 - -
Alju02g3869 381 SMART iq_5 134 156 IPR000048 GO:0005515
Alju02g3869 381 MobiDBLite consensus disorder prediction 254 283 - -
Alju02g3869 381 MobiDBLite consensus disorder prediction 352 368 - -
Alju02g3869 381 Coils Coil 191 218 - -
Alju02g3869 381 MobiDBLite consensus disorder prediction 40 79 - -
Alju02g3869 381 MobiDBLite consensus disorder prediction 203 231 - -
Alju02g3869 381 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Alju02g3869 381 MobiDBLite consensus disorder prediction 262 282 - -
Alju02g3869 381 MobiDBLite consensus disorder prediction 205 220 - -
Alju02g3869 381 MobiDBLite consensus disorder prediction 298 381 - -
Alju02g3869 381 PANTHER IQ-DOMAIN 5-RELATED 15 344 - -
Alju02g3869 381 Gene3D iswi atpase 130 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3869 Alju-ChrAlju02 57860364 57862620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3869 15 302 IQD Protein Family AT5G03040 42.953 1.79e-61 203