Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3852 ATGACAGCAACCCAGTATTCTGAGAAGTCAAGCATGGAGATGGAATCTTGTGTTCCGCCGGGGTTTAGATTTCGTCCGACAGAGGAAGAACTAGTAGGGTACTACCTCAAGAAGAAGATAAACTGGATGAAAATGGATCTAGATGTGATTGGAGAGATCGATCTGTACAAAATCGAACCATGGGACATTCAAGATAGATGCAAGATGGGGTACGAGGAAGAGAAGGAGTGGTATTTCTTCAGTCACAAGGACAAGAAGTATCCGACAGGGACGAGGACGAACAGGGCGACGGCGGCAGGGTTCTGGAAAGCAACGGGGAGGGACAAGGCGGTGATGTCGAAGAAGAACAGAATCATAGGAATGAGGAAGACCCTCGTCTTCTACAAGGGACGTGCCCCTTATGGCTCCAAGACCGATTGGATTATGCATGAATTTCGCCTCCAAACCTCCCAACACGCCCCTCCTCAGGAAGAAGGATGGGTGGTGTGCCGAGCATTCAAGAAACCTAGTCCTACGACTCAGAACAGACAAAGCTTCGAATGTTGGAGCAGCCAAGCACTCTTTTTCAGGGATCAAATAAGCAACCCTACAAGACCTCAATCTCTATCATTTCCCAACGAAACCCTAAATCAGATGCTTTATCCATCAAATGAAGGACCAAGTTTCAGCCATCCCTTCACTTCCAATCAACACCACCAACAGTTTCTGTCAAACGACACCGTTTTGGAGGACAATAACAACAGCCAGCTTGTTGAGCTCATTCCACAGCTACATAGCCCCACAACAGCTAGAGCAGTGAAACAACATGGCTTCACAAATGAAGACTGTTACAATAACAGTCAAGAAGGGACTACGACGACCAATAATAATAACGTTAACGATGGTCAAGGCATTGATTGGAAGAGCTTGGACAACTTGTTCACTTCCCAGTTCGCGGATGATGATACTGCCTCTGCTGCTGCTGCTTATTTTTCTCATCCAAACATGCCCTTGATGCCGCATAATATTAATAGTAGTAGTCATGACCTACAAGTATTACAACCTCAAAATCATCAAGCTAGCCATGTCCTGGGATGCTTTCCTCATTCATAA 1092 0.4588 MTATQYSEKSSMEMESCVPPGFRFRPTEEELVGYYLKKKINWMKMDLDVIGEIDLYKIEPWDIQDRCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKKNRIIGMRKTLVFYKGRAPYGSKTDWIMHEFRLQTSQHAPPQEEGWVVCRAFKKPSPTTQNRQSFECWSSQALFFRDQISNPTRPQSLSFPNETLNQMLYPSNEGPSFSHPFTSNQHHQQFLSNDTVLEDNNNSQLVELIPQLHSPTTARAVKQHGFTNEDCYNNSQEGTTTTNNNNVNDGQGIDWKSLDNLFTSQFADDDTASAAAAYFSHPNMPLMPHNINSSSHDLQVLQPQNHQASHVLGCFPHS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3852 363 Pfam No apical meristem (NAM) protein 19 147 IPR003441 GO:0003677|GO:0006355
Alju02g3852 363 Gene3D NAC domain 27 171 IPR036093 GO:0003677|GO:0006355
Alju02g3852 363 FunFam Nac domain-containing protein 86 27 171 - -
Alju02g3852 363 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Alju02g3852 363 SUPERFAMILY NAC domain 12 168 IPR036093 GO:0003677|GO:0006355
Alju02g3852 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3852 Alju-ChrAlju02 57699262 57702602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3852 14 363 NAC Transcription Factor Family AT1G71930 47.790 1.61e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g3852 NAM 5e-35 No_clan