Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3843 ATGGGTGGGTATGGTTACATATCGTCTTTTTTCTTCGTTTCTCTGTGCTTTTGGTTATGCCCAATGGTGTTGTGTAAGCTATCCCAGAACCAAACCAACACCATGATCTTACTCTCCCAGCTTCTTAATGGAACCGAATTAACTGATTGGAAAATAAACCCAAATCCATGTGGATGGAAGGGAGTTGCTTGCGATCAGACCAATTCCTCTGTAATCAAATTTCTTCTATCTGGTCATTCCATCTCTTCCTCCAAATTTCTGACTCTTCTCTGCCAAATTGAAAGCTTGCAGCATCTTGATCTTTCTGGTAACGACATTAGCTCAATTCCAGACAATTTCATCACTGATTGTGGAAAGGTTGAGGGGCTGAAGTTGCTCAATTTCAGTAATAACAACATAAGGGGTCCCTTGCCTACTTTTCGTGGATTTGATGTGCTAGAATCCCTGGATATGTCTTTCAATCACTTTTCTGGAAAAGTTGATTCTGAGTTAGCTGGATTAGCCAGCCTCAGGAGCTTAAATCTTAGTTTCAATTCTTTCACTGGGCCCCTTCCCACCAAACTGGGAAATTCCGCCACTTTGGAGCAGCTTGAGCTAGGTAATAATTACTTTGAAGGAACAATCCCTGCTGAAATCCTGAGTCACACAAATTTGACTTTACTTGATCTTAGAAGAAATAATATTTCAGGGTCTATTCCTAGTAACATAGGAGATCTGTCCAGATTGGAAACTTTGATTCTGTCCTCTAATCAGCTTGGAGGGGAAGTCCCAAGCGCACTCTCGAACATCAAAACCCTCGTCCGTTTTGCAGCCAATGAAAACGAATTTATTGGGTCTGTTCCCAGCGGAATTACAAGATTTCTCAGGAACTTGGATCTCAGTTATAATAAGCTGTCTGGGCCTATTCCAGCAGGCCTTCTTTCACAATTAAATCTGGTGTCTGTGGATTTGTCCAATAACTCGTTATCTGGGCCTTTACCTGCAGACATATCTTCTAACATTGTCAGGTTGAGATTAGGGGGTAATTCTCTAAATGGGACGATATCTCCGAAGGCATTTACCACAGGTCAGAATTTGATGTATATCGAACTCGAAGCCAATAACTTGACAGGTCAAATACCTTCTGAGGTGGGCTCTTGTCCGCACTTGGCCTTGTTGAACTTGGCTCAGAATCAGCTATCTGGTGAATTGCCTGTGGAGCTTGGCAAGCTTAGCAATCTTCAAGTCTTGCAGCTTCAGCGGAACAAGTTTTCTGGACAAATACCAACTCAAGTTTCTCAACTACAGAAGCTGTTGACGCTGAATTTGAGCGACAATTCTCTGAATGGAACCATTCCGCCGGCAATGTTCAATTTGGTAACGCTCAGTAAGCTTTACTTACAGCAAAACAATCTCAGGGGCTCTATTCCCACATCTATAATTGGCATGGAATCTCTTATTGAACTTCAACTTGGAGAAAATCAGCTAAGTGGTTTGATTCCAAAAATGCCAGGGAGTCTTCAGATTGCCTTGAATCTCAGCAGTAATCTCTTTGAGGGGCCTATTCCTAGCACTCTTGATGGGTTGAATAGCCTGGAAATCTTGGATCTCTCAAATAACAAATTTGATGGTAAAATTCCATATTTTCTTACCAAAATGCCGGCTTTGACACAGTTGGAACTTTCTAATAATTCGCTGTATGGTGTCATTCCGGACTTTAATCCTCATGTTAAAGTTGATTTGGGTGGAAATAATGGTCTCGTAAACAAAACTGCAACTTCCAACACTTCTCCAAGATCTCCAAAGGGAAGTCCTGTTGTCATGGCAGTTCTTATTGCAATTGCAGCTGCAGTTTTTCTGGTTGGCCTGGTCACTGTGCTGGCTGTATTAATCTCACGACGCCTATACAGGGTAAATGACGAACACTTGCAGCCCCATGAAGACCCTCAACCCCCTCAGGTCATCCAAGGTAACTTATTAACTCCCAACGGAATTCACAGATCCAACATTGATTTCTGTAAGGCCATGAAAGATGTTGCTGAAACATCAAACGTCACTCTAAAAACAAGGTTTTCAACTTATTACAAGACTATTATGCCATCTGGATCAATCTACTTTGTCAAGAAGCTTAACTGGAGTGAGAAGCTATTCCCACTGGGCAGCCATGATAAATTTGGTAAAGAACTAGAGGTCTTGGCAAAATTGAACAATTCAAATGTCATGACTCCTTTGGCTTATGTTCTGTCCACTGACAGCGCTTACATACTGTATGAATTTTTCTCAAATGGCTCCCTTTATGATGCTCTTCACGGAAGCTTGCGAAACTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGCGGCTCAAGGTCTCTCTTTTCTGCATGGATTTACTTCAGGCCCAATTCTTCTCCTTGACCTATCAAGTAAAAGTATAATGCTGAAGTCCCTCAAGGAGCCTCTAGTTGGAGATATTGAACTCTACAAGGTGATTGATCCTTCAAAGAGTACGGGAAGTGTTTCTGCAGTTGCTGGTTCTGTGGGCTATATTCCTCCAGAGTATGCATACACAATGAGAGTGACAATGGCTGGGAATGTGTACAGCTTTGGGGTGATCCTGCTTGAATTGTTAACGGGAAAGCCACCAATGACTGATGGGACTGAATTGGTGAAGTGGGTGATGCGCAACTCGGCGAAGCAAGAACACATTCTGGATTTTAGTGTCAGTAAAACATCTCAGGCTGTCAAAACCCAGATGCTTGCCATTCTTCAGGTAGCTCTTGCCTGTGTCAGTTCATCCCCTGAAGCAAGACCAAAGATGAAGAGTGTGCTCCGGATGCTCCTGAATGCACGATAA 2841 0.4256 MGGYGYISSFFFVSLCFWLCPMVLCKLSQNQTNTMILLSQLLNGTELTDWKINPNPCGWKGVACDQTNSSVIKFLLSGHSISSSKFLTLLCQIESLQHLDLSGNDISSIPDNFITDCGKVEGLKLLNFSNNNIRGPLPTFRGFDVLESLDMSFNHFSGKVDSELAGLASLRSLNLSFNSFTGPLPTKLGNSATLEQLELGNNYFEGTIPAEILSHTNLTLLDLRRNNISGSIPSNIGDLSRLETLILSSNQLGGEVPSALSNIKTLVRFAANENEFIGSVPSGITRFLRNLDLSYNKLSGPIPAGLLSQLNLVSVDLSNNSLSGPLPADISSNIVRLRLGGNSLNGTISPKAFTTGQNLMYIELEANNLTGQIPSEVGSCPHLALLNLAQNQLSGELPVELGKLSNLQVLQLQRNKFSGQIPTQVSQLQKLLTLNLSDNSLNGTIPPAMFNLVTLSKLYLQQNNLRGSIPTSIIGMESLIELQLGENQLSGLIPKMPGSLQIALNLSSNLFEGPIPSTLDGLNSLEILDLSNNKFDGKIPYFLTKMPALTQLELSNNSLYGVIPDFNPHVKVDLGGNNGLVNKTATSNTSPRSPKGSPVVMAVLIAIAAAVFLVGLVTVLAVLISRRLYRVNDEHLQPHEDPQPPQVIQGNLLTPNGIHRSNIDFCKAMKDVAETSNVTLKTRFSTYYKTIMPSGSIYFVKKLNWSEKLFPLGSHDKFGKELEVLAKLNNSNVMTPLAYVLSTDSAYILYEFFSNGSLYDALHGSLRNSLDWASRYSIAVGAAQGLSFLHGFTSGPILLLDLSSKSIMLKSLKEPLVGDIELYKVIDPSKSTGSVSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPPMTDGTELVKWVMRNSAKQEHILDFSVSKTSQAVKTQMLAILQVALACVSSSPEARPKMKSVLRMLLNAR 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3843 946 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 753 946 - -
Alju02g3843 946 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 641 752 - -
Alju02g3843 946 Pfam Leucine rich repeat 333 393 IPR001611 GO:0005515
Alju02g3843 946 Pfam Leucine rich repeat 504 559 IPR001611 GO:0005515
Alju02g3843 946 Pfam Leucine rich repeat 95 156 IPR001611 GO:0005515
Alju02g3843 946 Pfam Leucine rich repeat 405 465 IPR001611 GO:0005515
Alju02g3843 946 Gene3D Ribonuclease Inhibitor 39 185 IPR032675 -
Alju02g3843 946 Gene3D Ribonuclease Inhibitor 186 286 IPR032675 -
Alju02g3843 946 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 328 592 - -
Alju02g3843 946 ProSiteProfiles Leucine-rich repeat profile. 95 116 IPR001611 GO:0005515
Alju02g3843 946 Pfam Leucine rich repeat N-terminal domain 37 65 IPR013210 -
Alju02g3843 946 Gene3D Ribonuclease Inhibitor 287 590 IPR032675 -
Alju02g3843 946 Gene3D Phosphorylase Kinase; domain 1 662 752 - -
Alju02g3843 946 SUPERFAMILY RNI-like 256 563 - -
Alju02g3843 946 ProSiteProfiles Protein kinase domain profile. 673 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g3843 946 Pfam Protein tyrosine and serine/threonine kinase 715 942 IPR001245 GO:0004672|GO:0006468
Alju02g3843 946 SMART LRR_typ_2 546 568 IPR003591 -
Alju02g3843 946 SMART LRR_typ_2 239 263 IPR003591 -
Alju02g3843 946 SMART LRR_typ_2 428 452 IPR003591 -
Alju02g3843 946 SMART LRR_typ_2 404 427 IPR003591 -
Alju02g3843 946 SMART LRR_typ_2 167 191 IPR003591 -
Alju02g3843 946 SMART LRR_typ_2 522 545 IPR003591 -
Alju02g3843 946 SMART LRR_typ_2 476 499 IPR003591 -
Alju02g3843 946 SMART LRR_typ_2 93 116 IPR003591 -
Alju02g3843 946 SUPERFAMILY Protein kinase-like (PK-like) 684 942 IPR011009 -
Alju02g3843 946 PRINTS Leucine-rich repeat signature 522 535 - -
Alju02g3843 946 PRINTS Leucine-rich repeat signature 288 301 - -
Alju02g3843 946 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 187 280 - -
Alju02g3843 946 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 186 - -
Alju02g3843 946 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 216 942 - -
Alju02g3843 946 SUPERFAMILY L domain-like 48 328 - -
Alju02g3843 946 Gene3D Transferase(Phosphotransferase) domain 1 753 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3843 Alju-ChrAlju02 57632991 57636141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3843 146 946 Receptor kinase-like Gene Family AT2G41820 38.896 1.46e-155 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju02g3843 PK_Tyr_Ser-Thr 5.8e-23 CL0016