Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3794 ATGGCGGGATCGGAGACAGGGACGCCGACGGCGGCGTCGGCACCGGCGACTCCGGGGACTCCGGCGCCTCTGTTCACGTCGCTGCATGTGGACTCTCTTTCATACGAGAGGAACTCAATGCCGAGGTGCAAGTGTTTGCCAACGAAGGGCCACACCTGCTTCACTGATTTCTCTGTACCTACTCCTGACGTGTCCCTCGCGCGCAAGATCGGAGCAGAGTTCGTAGGCACGTTCTTACTGATGTTCGCGGCATCGGCGGGGCCCATCCTGAACCAGAAATACAACGGAGCAGAAAGCCTGCTGGGCAATGCCGCTTGTGCCGGCTTAGGTGTGATGATCGTCATCTTGTCCACCGGCCACATTTCCGGCGCCCACCTCAACCCTTCCCTCACCATGGCCTTTGCCACCTTCCGCCACTTCCCGTGGATCCACGTCCCCGGCTACATCGCCGCTCAGGTCTCCGCCTCCATCTGCGCCTCCTTCGCCCTCAAGGGCATCTTCCATCCCTACCTGTCCGGCGGCGTCACCATTCCTTCAGAGACTACCAGCGTTGGCCAGGCTTTCGCGCTTGAGTTCATAATCACTTTCAATCTCCTCTTCGTCGTCACTGCTGTTGCCACTGATACTCGTGCTGTTGGGGAATTGGCTGGAATTGCTGTTGGAGCCACAGTTTTGCTCAACATTCTCATTTCTGGGCCGGCAAGTGGCGGTTCAATGAACCCGGTTCGCACATTGGGTCCAGCCGTGGCAGCAGGAAATTACAAGCACATATGGATATATCTGATTGCGCCTACCCTCGGAGCTCTGGCCGGTGCCGGTGTTTACACTCTCGTCAAGCTCCGCGACCACGAGGCTGAGCCACCACGCCAGGTTCGGAGCTTCCGTCGCTAG 891 0.5881 MAGSETGTPTAASAPATPGTPAPLFTSLHVDSLSYERNSMPRCKCLPTKGHTCFTDFSVPTPDVSLARKIGAEFVGTFLLMFAASAGPILNQKYNGAESLLGNAACAGLGVMIVILSTGHISGAHLNPSLTMAFATFRHFPWIHVPGYIAAQVSASICASFALKGIFHPYLSGGVTIPSETTSVGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPASGGSMNPVRTLGPAVAAGNYKHIWIYLIAPTLGALAGAGVYTLVKLRDHEAEPPRQVRSFRR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3794 296 FunFam Aquaporin NIP2-1 55 290 - -
Alju02g3794 296 MobiDBLite consensus disorder prediction 1 15 - -
Alju02g3794 296 MobiDBLite consensus disorder prediction 1 20 - -
Alju02g3794 296 Gene3D Glycerol uptake facilitator protein. 58 291 IPR023271 -
Alju02g3794 296 ProSitePatterns MIP family signature. 125 133 IPR022357 -
Alju02g3794 296 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3794 296 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3794 296 PRINTS Major intrinsic protein family signature 144 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3794 296 PRINTS Major intrinsic protein family signature 107 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3794 296 PRINTS Major intrinsic protein family signature 190 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3794 296 PRINTS Major intrinsic protein family signature 68 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3794 296 Pfam Major intrinsic protein 64 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3794 296 CDD MIP 68 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3794 296 PANTHER AQUAPORIN NIP2-1 52 284 IPR034294 -
Alju02g3794 296 SUPERFAMILY Aquaporin-like 65 289 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3794 Alju-ChrAlju02 56906983 56914564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3794 24 296 Major Intrinsic Protein MIP AT4G10380 75.357 5.02e-153 428