Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3792 ATGGCAGGATCGGAGACGGGGACGCCGACGGCAGCATCGTCACCGGGGACTCCGGCGCCGTTGTTCACGTCGCTGCATGTGGACTCTGCGTCGTACGAGAGGTGTAAGTGTTCGCCAACGAAGGGCTACACCTGCTTCACTGATCTCTGTGTCCCCACTCCCTCTGTGTCCCTCACCCGCAAGATTGGAGCAGAGTTCGTGGGCACCTTCTTACTGATGTTCGTGGCATCGGCGGGACCCATCGTCAACCAGAAATACAACGGAGCAGAAGGCCTGCTGGGCAACGCAGCATGTTCCGGCTTAGGTGTGATGATGGTGATCCTGTCCACCGGCCACATCTCCGGCGCTCACCTCAACCCTTCCGTCAGTATCGCCTTTGCCACCTTCCGCCACTTCCCGTGGGTCTACGTCCCCGCCTACATCGCCGCTCAGGTCTCCGCCTCCATCTGCGCCTCCTTCGCCCTCAAGGCCATCTTCCATCCCTACATGTCCGGCGGCGTTACCATTCCTTCAGAGACTATGACCGTCGTCCAGGCTTTTGCGCTTGAGTTCATAATCACTTTCATTCTCCTCTTCGTCGTCACTGCGGTTGCCACTGATACTCGTGCTGTTGGGGAATTGGCTGGGATTGCTGTTGGGGCCACGGTTTTGCTCAACAGTCTCATTGCTGGGCTGGCAACTGGTGCCTCGATGAACCCGGTTCGCACATTGGGTCCAGCCGTGGCAGCAGGAAATTACAAGCACGTATGGATATATCTGATTGCACCCACCCTCGGAGCTCTGGCTGGTGCCGGTGTTTATACTCTCGTCAAGCTCCGCGACCACGAGGCTGAGCCACCACGCCAGGTTCGGAGCTTCCGTCGCTAG 867 0.5871 MAGSETGTPTAASSPGTPAPLFTSLHVDSASYERCKCSPTKGYTCFTDLCVPTPSVSLTRKIGAEFVGTFLLMFVASAGPIVNQKYNGAEGLLGNAACSGLGVMMVILSTGHISGAHLNPSVSIAFATFRHFPWVYVPAYIAAQVSASICASFALKAIFHPYMSGGVTIPSETMTVVQAFALEFIITFILLFVVTAVATDTRAVGELAGIAVGATVLLNSLIAGLATGASMNPVRTLGPAVAAGNYKHVWIYLIAPTLGALAGAGVYTLVKLRDHEAEPPRQVRSFRR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3792 288 ProSitePatterns MIP family signature. 117 125 IPR022357 -
Alju02g3792 288 SUPERFAMILY Aquaporin-like 56 281 IPR023271 -
Alju02g3792 288 FunFam Aquaporin NIP2-1 48 282 - -
Alju02g3792 288 Gene3D Glycerol uptake facilitator protein. 50 283 IPR023271 -
Alju02g3792 288 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3792 288 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3792 288 PRINTS Major intrinsic protein family signature 250 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3792 288 PRINTS Major intrinsic protein family signature 60 79 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3792 288 PRINTS Major intrinsic protein family signature 99 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3792 288 PRINTS Major intrinsic protein family signature 136 155 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3792 288 Pfam Major intrinsic protein 55 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g3792 288 PANTHER AQUAPORIN NIP2-1 33 276 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3792 Alju-ChrAlju02 56885724 56889448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3792 21 288 Major Intrinsic Protein MIP AT4G10380 72.500 3.58e-143 403