Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3782 ATGGGTTGCGTTCAGGCTAAGTCATCGGGGGGTTCATCGGAAGCTAAGGGCTTAGAGAGGCTGAAATTAGAAAATGGGTATGTTGGAAATGAAGATTTCACTGCTCATCGACGATCGATGGGCCTGAGATATGGAGAAATCGAAGAGATTGCTAGGGTAAACCAGCGCGAAATCAGAAAGCATCGGCTTGGGTCTGGTATTGGGAACGAAGAAAGCAGAAATCGCTGGGTTACAGAGGGGAAGGGCAATGCTGTCCATGATGGTGAGAAATTGGCAAGGAAATGTTTTGACGATGAGATGGTTGATGGATGGCCCAGATGGTTTGTTGACAATGTTCCTCGAGAAGTTTTGGCTGGCTTGGTTCCCCGGAGTGCTGATTCATACATAATGATTGACAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCACGAGATAGGGCCACCAGAGAACTTGTGGCCCTTAAGAAGGTTCACTTTGATAAATCCCAGCCTGAGAGCATTAAATTTATGGCAAGAGAAATTATGATATTACAGAGACTGGATCATCCTAATGTCATAAAACTTAAAGGATTGGCTACATCAAGAATGCAATATAGTATTTATCTTGTTTTTGATTTCATGCAATCAGACTTGGCTAGAATGATATCTCGTCCTGAAGAAAGATTCACTGAACCACAGGTTAAAAATTTTTCTCATTGA 705 0.4241 MGCVQAKSSGGSSEAKGLERLKLENGYVGNEDFTAHRRSMGLRYGEIEEIARVNQREIRKHRLGSGIGNEESRNRWVTEGKGNAVHDGEKLARKCFDDEMVDGWPRWFVDNVPREVLAGLVPRSADSYIMIDKVGQGTYSNVYKARDRATRELVALKKVHFDKSQPESIKFMAREIMILQRLDHPNVIKLKGLATSRMQYSIYLVFDFMQSDLARMISRPEERFTEPQVKNFSH 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3782 234 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Alju02g3782 234 SMART serkin_6 128 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g3782 234 Gene3D Phosphorylase Kinase; domain 1 122 224 - -
Alju02g3782 234 Pfam Protein kinase domain 130 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g3782 234 SUPERFAMILY Protein kinase-like (PK-like) 120 232 IPR011009 -
Alju02g3782 234 FunFam probable serine/threonine-protein kinase At1g54610 115 210 - -
Alju02g3782 234 ProSiteProfiles Protein kinase domain profile. 128 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g3782 234 PANTHER CELL DIVISION PROTEIN KINASE 126 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3782 Alju-ChrAlju02 56773215 56774284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3782 123 232 Core Cell Cycle Gene Families AT5G10270 39.200 7.81e-20 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju02g3782 Pkinase 1.4e-19 CL0016