Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3778 ATGGATACTCATGCTGAAGAGTTGCCTCAATACATACATATAACGCAGAATGAGTTTTTCACTAGAAGGAACATGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATATGATGCTATTGACCCTGATAGTGCATGTGGGGATGGGTGTCTCAACGTATTGACCAACTCTGAATGCACCCCTGGCTATTGCCCTTGTGGTGTCTTTTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTCAAAACTGAAGGCCGTGGATGGGGTCTTTTGGCTGATGAGAACATTAAGGCAGGCCAATTTATCATTGAATACTGTGGAGAAGTAATTTCATGGAAAGAAGCCAAGCGAAGAGCCCAGGCTTATGAAACTGAAGGTCTTAAGGATGCATTCATTATTTGTCTTAACGCCTCTGAATCCATTGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAATCATTCATGCCAGCCAAATTGTGAGACAAGGAAATGGAATGTCTTGGGTGAGATAAGAGTTGGAATATTTGCAAAACAAGATATACCTGTTGGAGCTGAACTGGCATATGATTATAATTTTGAATGGTTTGGTGGTGCGAAGGTTCGTTGCCTCTGTGGTGCAGCCAAATGTTCTGGATTCCTTGGAGCGAAATCTCGTGGTTTTCAGGAAGATACATATTTATGGGAAGATGATGATGAAAGGTACACTGTTGAGAAAATTCCAGTATATGACTCTGCAGAGGATGAACCTCCCTCAAAGTTCCTTAGAAACTTGCATTCTGACATTCCTGGTAAGCAAGTTAATGGGAAAACGGAACACTCCATGGACGTTGTCATAAAACCTGAACAACTATCAGAGTCAACTGCTTTTGGCATTCAACCGCTTGGATCAGTTCCAGAAAAGGGTTTGCATGTCAATTCAATAAAATCTGAAATGGAAAGTGATGATATGAAGGCCTTTCCACAAAACAATGCAATGATATCACGAATCAGAAGTAATACTGCGGCCCGAAACTATCGCATTGGACCTAGGTCCATTCCTGCCAAAAAATCAAAGAAATATAATGAAAGGTTCAAAAAAATCGCACAGAAGCAAGTCGATGTGAAGTCTGCTGCTGAATCTTTAGCATCAAAAGAAGCACAAGAAGAGATTTTAAGATATGAGGAAATGAAGAATGAGGCGACTTGTGGTCTTGATAACTTGTACAATGAAATTCGACCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCGACGAGTGTGGCAGAGAAGTGGATTGAAGCTAGCTGTTTGAAATTGAAGGCAGAGTTTGACCTTTACTCTTGCATTGTCAAAAAATTTTCCTGCACTCCTCTCAAGCCTCGTGGCCTCCCAAAACCTTCTCCTTCTCCTTCTCCTTCTCCTCAAGTTGATAATGAAAATAAGTTGCTGACGAATTGA 1473 0.4067 MDTHAEELPQYIHITQNEFFTRRNMKQKEEDIAICECKYDAIDPDSACGDGCLNVLTNSECTPGYCPCGVFCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRAQAYETEGLKDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGAELAYDYNFEWFGGAKVRCLCGAAKCSGFLGAKSRGFQEDTYLWEDDDERYTVEKIPVYDSAEDEPPSKFLRNLHSDIPGKQVNGKTEHSMDVVIKPEQLSESTAFGIQPLGSVPEKGLHVNSIKSEMESDDMKAFPQNNAMISRIRSNTAARNYRIGPRSIPAKKSKKYNERFKKIAQKQVDVKSAAESLASKEAQEEILRYEEMKNEATCGLDNLYNEIRPAIEEHERDSQDSVSTSVAEKWIEASCLKLKAEFDLYSCIVKKFSCTPLKPRGLPKPSPSPSPSPQVDNENKLLTN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3778 490 ProSiteProfiles SET domain profile. 83 200 IPR001214 GO:0005515
Alju02g3778 490 PANTHER SET DOMAIN PROTEINS 7 441 - -
Alju02g3778 490 MobiDBLite consensus disorder prediction 462 490 - -
Alju02g3778 490 FunFam Histone-lysine N-methyltransferase 1 235 - -
Alju02g3778 490 Pfam SET domain 94 200 IPR001214 GO:0005515
Alju02g3778 490 SMART PostSET_3 207 223 IPR003616 -
Alju02g3778 490 Gene3D SET domain 1 237 IPR046341 -
Alju02g3778 490 SUPERFAMILY SET domain 9 220 IPR046341 -
Alju02g3778 490 ProSiteProfiles Post-SET domain profile. 207 223 IPR003616 -
Alju02g3778 490 SMART shorttest3 30 82 IPR006560 GO:0005634|GO:0042054
Alju02g3778 490 ProSiteProfiles AWS domain profile. 30 81 IPR006560 GO:0005634|GO:0042054
Alju02g3778 490 SMART set_7 83 206 IPR001214 GO:0005515
Alju02g3778 490 Pfam AWS domain 43 80 IPR006560 GO:0005634|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3778 Alju-ChrAlju02 56729604 56734043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3778 65 222 C2H2 Transcription Factor Family AT2G23740 34.254 4.29e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju02g3778 SET 7.9e-19 No_clan