Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3775 ATGGCCATGTTACACAATTTCTCCTTTAAAATTGCTCAAAGCGGTGGTATTTACATATGCTTGCTCACGGTGGCGCACCAACGGCGATCAGGCGATCTCGTGAGTTTCACGGCAGAACGCGGCGGCGGAGAGGGAACCACTGACTACGGGCAGTCGGTGGGATTTAACAACGAAGCTGAAGAGGTGGTGGCAGTTACAAAGGCGGAATCCATGGAGAGAGTGATGTCAGGGTATGGCGGCAGCGCCGGAGAGTTGTCGGCTATGGTTTCGGCGCTGACTCATGTGGTGTCGTCAGGTTCTTCTGGATTCAACAGACACACTAATAATGAATGGCTCCAAGGAATTAGCGGTTTTCCTATGATGTCATCACATGTTTCTTCTCCTCGTTTGTCTCCTTCTTCAGGTCCTTTCATGGCCTCTGCCTCTGGTTCTTCAAGGGCAGGTCAGAAAAGAGGCCGTCAACAAGAAGAAGAAGATGAAGCCGCCCACAAAGCCGCCATCATTGACTTCACTGCACCATTATTACAGAACGAGTCGTCTTCAGCAGTGACGGAGGCGGAAGATGCGTCGGCGGTGGCTACAGCTGCGTTACCGGTGATGCCGTCGTCGGGTGAAACTGGTAGTTCGCATGAGGAAACAGGGGAGAGGAGGAGGAGATACAGAGGAGTGAGGCAGAGGCCGTGGGGTAAGTGGGCGGCGGAGATTCGCGACCCTCACAAGGCGGCGAGGGTATGGCTTGGCACGTTCGACACGGCGGAGGCGGCCGCCAGAGCTTATGACGAAGCCGCATTGAGGTTCAGAGGTAGCAGAGCCAAACTAAACTTTCCAGAAAACGTCAGGGCAGTTCCGGTGCCAGTTCAAAATGTTCCGGTCACCAGCCACGTCTTTCAGCAATCCTCGGCGGCGGCGCTTCCGTTCATGCAGGCGTCATCTTTTCAATGGCCATCTGATTTGGCCAGAGACTATTGGAATTACAGCCAGCTGTTACAGAGCTCCGGCGACTTCCATGGTCAACGGCAGCCACAGCCGCCGCAACAGATACCGCCGAGTTTGGTGCAGCAATGGCTCTATAATTCTCAAATAAGTGCTCTTCAATCGTCGTCGTTGTTTTCGCCGGTGTCGTTGTCGTCTTCTTCGTCTCCCTCTGCATTTTCGCCTTCTAGTCAATTATCCTCTGCTTCATTTCCCCTGCCTCCAGGTCAACAAATAGGCTATTTCCGACCACCAATGGGAAACCAAACTCACGGCGGAGAAAACTCATATTTTCCGACGTCAACATGGTCAGACACCGGTAACTTTCCTCCGCCGTCTAGGTGA 1317 0.533 MAMLHNFSFKIAQSGGIYICLLTVAHQRRSGDLVSFTAERGGGEGTTDYGQSVGFNNEAEEVVAVTKAESMERVMSGYGGSAGELSAMVSALTHVVSSGSSGFNRHTNNEWLQGISGFPMMSSHVSSPRLSPSSGPFMASASGSSRAGQKRGRQQEEEDEAAHKAAIIDFTAPLLQNESSSAVTEAEDASAVATAALPVMPSSGETGSSHEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVPVPVQNVPVTSHVFQQSSAAALPFMQASSFQWPSDLARDYWNYSQLLQSSGDFHGQRQPQPPQQIPPSLVQQWLYNSQISALQSSSLFSPVSLSSSSSPSAFSPSSQLSSASFPLPPGQQIGYFRPPMGNQTHGGENSYFPTSTWSDTGNFPPPSR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3775 438 MobiDBLite consensus disorder prediction 199 221 - -
Alju02g3775 438 FunFam Ethylene-responsive transcription factor 2 218 277 - -
Alju02g3775 438 MobiDBLite consensus disorder prediction 413 438 - -
Alju02g3775 438 MobiDBLite consensus disorder prediction 122 149 - -
Alju02g3775 438 Gene3D AP2/ERF domain 218 278 IPR036955 GO:0003700|GO:0006355
Alju02g3775 438 PANTHER DNA-BINDING DOMAIN 166 359 IPR044808 GO:0003700|GO:0009873
Alju02g3775 438 Pfam AP2 domain 219 268 IPR001471 GO:0003700|GO:0006355
Alju02g3775 438 SUPERFAMILY DNA-binding domain 219 277 IPR016177 GO:0003677
Alju02g3775 438 MobiDBLite consensus disorder prediction 385 438 - -
Alju02g3775 438 ProSiteProfiles AP2/ERF domain profile. 219 276 IPR001471 GO:0003700|GO:0006355
Alju02g3775 438 SMART rav1_2 219 282 IPR001471 GO:0003700|GO:0006355
Alju02g3775 438 CDD AP2 227 278 IPR001471 GO:0003700|GO:0006355
Alju02g3775 438 PRINTS Ethylene responsive element binding protein signature 220 231 IPR001471 GO:0003700|GO:0006355
Alju02g3775 438 PRINTS Ethylene responsive element binding protein signature 242 258 IPR001471 GO:0003700|GO:0006355
Alju02g3775 438 MobiDBLite consensus disorder prediction 122 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3775 Alju-ChrAlju02 56704370 56707359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3775 179 294 AP2-EREBP Transcription Factor Family AT2G33710 55.833 9.91e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g3775 AP2 9.1e-15 CL0081